PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003986-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 363aa    MW: 41116.9 Da    PI: 4.882
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003986-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS39.86.8e-13255255
            GRAS  2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar 55
                    ++lL++cA+a++++d++ aq++L+ l+++a pdgd++qRl+  f++AL  r ar
  AUR62003986-RA  2 EQLLVHCAQAIDNNDATPAQQILWVLNNIAPPDGDSNQRLTCAFLRALILRAAR 55
                    79**********************************************999887 PP
2GRAS190.88.9e-5959358101372
            GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvl.......v 182
                      Ilea+eg + vHi+D+++++++Q p+L++++a+R   ++pp++ +T+ +  ++g    +   +  +g +L +fA++ gv +ef+++        
  AUR62003986-RA  59 FILEAIEGRTGVHIVDLSVTHCMQIPTLIDSIATRYqgRQPPTVTLTVGAFTQQGppmfDFICYDDLGVKLINFARSKGVVLEFKAVpttpsdgF 153
                     59*********************************9666799*****9999888899999999************************99988885 PP

            GRAS 183 akrledleleeLrvkp............gEalaVnlvlqlhrll.....desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflea 260
                     a+ l+++++++ +++             +Eal++n++++lh+l      +++  + s r+ + k+++slsP++vvvve+++d +s +++ r+ +a
  AUR62003986-RA 154 ASVLDEVRTRQEQMRFlygnphhqeeleEEALIINCQMSLHYLNhaepeEDPSVVMSMRSMFFKALRSLSPTMVVVVEEDVDFTSRNLVGRLRSA 248
                     5555555433322111223446666788**************984444323333344899*********************************** PP

            GRAS 261 leyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveees 355
                     ++y++  fd++++ lpr s++r ++E+  + ++i+nv+++eg++r+er+e   +W++r++ea F++v l+ +a++++k++l++++  g+  ++e+
  AUR62003986-RA 249 FNYFWIPFDTVDTFLPRGSKQREWYEAD-ICWKIENVISHEGDQRVERQEPRTRWSQRMMEAEFRAVGLTGEATMEVKAMLEEHA-TGWGSKKEE 341
                     ****************************.********************************************************.888999999 PP

            GRAS 356 gslvlgWkdrpLvsvSa 372
                     + +vl+Wk++++v+++a
  AUR62003986-RA 342 EDIVLTWKGHNVVFATA 358
                     99***********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MEQLLVHCAQ AIDNNDATPA QQILWVLNNI APPDGDSNQR LTCAFLRALI LRAARTPAFI  60
LEAIEGRTGV HIVDLSVTHC MQIPTLIDSI ATRYQGRQPP TVTLTVGAFT QQGPPMFDFI  120
CYDDLGVKLI NFARSKGVVL EFKAVPTTPS DGFASVLDEV RTRQEQMRFL YGNPHHQEEL  180
EEEALIINCQ MSLHYLNHAE PEEDPSVVMS MRSMFFKALR SLSPTMVVVV EEDVDFTSRN  240
LVGRLRSAFN YFWIPFDTVD TFLPRGSKQR EWYEADICWK IENVISHEGD QRVERQEPRT  300
RWSQRMMEAE FRAVGLTGEA TMEVKAMLEE HATGWGSKKE EEDIVLTWKG HNVVFATALV  360
PS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-127GRAS family protein