PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003875-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 211aa    MW: 24025.3 Da    PI: 5.0504
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003875-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.4e-1973122255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W++eIrdp     +   r +lg+f taeeAa+a+++a+ +++g
  AUR62003875-RA  73 KYRGVRQRP-WGKWASEIRDP-----HraVRMWLGTFETAEEAARAYDRAAVRFRG 122
                     8********.**********7.....338************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MESNHEMNMM VSALSQVISG DDGGYSSMGI NQQPPIDGSH LIFESFQDQQ NFATWSPASS  60
TTSPRTRKYN RNKYRGVRQR PWGKWASEIR DPHRAVRMWL GTFETAEEAA RAYDRAAVRF  120
RGPRAKLNFS VSDYLPQLEE YNSNNIFYQN QEQQINNNNN YGNHVSPTNQ EPETSGFVQI  180
TDGAELEHWM NDMIDNTPPS LMYGDPSFGI *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.13e-20ERF family protein