PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62003871-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 814aa MW: 93654.9 Da PI: 6.6851

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62003871-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.8	6.3e-17	135	237	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkekdgkwevtkle 82 Y+++ +GFs+rk++++ +++++ +t++++vCs egkr++ +kk ++++ r+ + tr +Cka+++ k +k+g++ev + AUR62003871-RA 135 LYEKHVAILGFSIRKHTTRFKQHTKIVTEKNYVCSAEGKRHSGQKKtklvemvdeedvnvKTRKPRQVSITRSKCKACIRAKVNKEGQFEVVAHV 229 69999999********************************99999*******887888888899********************* PP FAR1 83 leHnHela 90 +HnHel+ AUR62003871-RA 230 IQHNHELT 237 ****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 814 aa Download sequence
MENLTFDTTN CSNLIHELLQ KQRQIETEFE IDLNRSIIEE EETNCFGDEF VPIFNNPDNA 60 DEAIDNADEA IENAEDAIHN AENQVVPDKS IDSNSEQTTK SDATKDTNPI DAYGLDLRGS 120 FVGVVRETFE EILELYEKHV AILGFSIRKH TTRFKQHTKI VTEKNYVCSA EGKRHSGQKK 180 TKLVEMVDEE DVNVKTRKPR QVSITRSKCK ACIRAKVNKE GQFEVVAHVI QHNHELTKPQ 240 WHYLHRSERK MTEEKVVTIK TMKSSGLTTM DTYNYMATEA GGEQNIGHSV VDHLNFCSRL 300 RMEQIETGDA QTLVNILSQE QSEDPNFFFR VKFDKEGRIC NIFWRDSIML EDYRIYGDVL 360 VFDTTYRTNR YNLICAPFVG INNHWHNCMF ACAFIGDETS DSFVWLLQTF FKAMEDRKPT 420 SIFTDQDQAM ANAILEVIPN TRHRLCICHL EQNAITRFGA LKKDKEFKFA FNQCLKMCVT 480 EQEFEAKWQA IDFFSAGILS SQRSESTNHA IGFRASKATT LIEFYTIFKK TTNRLRSTEK 540 YDEFTCSKLI AFTSLPLSGM LKHAAQVFTL SLFRNFEEEF GYSMATTVQM LGSNEECLLY 600 EVTLEDKPWS AHQVNNIQES QTVWCTCKNF EASGWLCYHC IRILHLHSVT RIPDKYVSKR 660 WTKFAKTEAW DKLKNQDPKQ QYIPWRQTMM RKYYNLILKS QENEETRAFM EESFRNSLKM 720 VEDLLASAAQ KESAEAASNI PDVADNTQSN TDASSASSTN TCVLIILDPK RAVTKGRSKR 780 AKGGLEKSKR KRKPTLPPPN SEFGSKTPNL RLF*

Sequence ? help Back to Top

Protein Sequence Length: 814 aa Download sequence

MENLTFDTTN CSNLIHELLQ KQRQIETEFE IDLNRSIIEE EETNCFGDEF VPIFNNPDNA  60
DEAIDNADEA IENAEDAIHN AENQVVPDKS IDSNSEQTTK SDATKDTNPI DAYGLDLRGS  120
FVGVVRETFE EILELYEKHV AILGFSIRKH TTRFKQHTKI VTEKNYVCSA EGKRHSGQKK  180
TKLVEMVDEE DVNVKTRKPR QVSITRSKCK ACIRAKVNKE GQFEVVAHVI QHNHELTKPQ  240
WHYLHRSERK MTEEKVVTIK TMKSSGLTTM DTYNYMATEA GGEQNIGHSV VDHLNFCSRL  300
RMEQIETGDA QTLVNILSQE QSEDPNFFFR VKFDKEGRIC NIFWRDSIML EDYRIYGDVL  360
VFDTTYRTNR YNLICAPFVG INNHWHNCMF ACAFIGDETS DSFVWLLQTF FKAMEDRKPT  420
SIFTDQDQAM ANAILEVIPN TRHRLCICHL EQNAITRFGA LKKDKEFKFA FNQCLKMCVT  480
EQEFEAKWQA IDFFSAGILS SQRSESTNHA IGFRASKATT LIEFYTIFKK TTNRLRSTEK  540
YDEFTCSKLI AFTSLPLSGM LKHAAQVFTL SLFRNFEEEF GYSMATTVQM LGSNEECLLY  600
EVTLEDKPWS AHQVNNIQES QTVWCTCKNF EASGWLCYHC IRILHLHSVT RIPDKYVSKR  660
WTKFAKTEAW DKLKNQDPKQ QYIPWRQTMM RKYYNLILKS QENEETRAFM EESFRNSLKM  720
VEDLLASAAQ KESAEAASNI PDVADNTQSN TDASSASSTN TCVLIILDPK RAVTKGRSKR  780
AKGGLEKSKR KRKPTLPPPN SEFGSKTPNL RLF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-80	FAR1 family protein