PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62003833-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Dof

Protein Properties

Length: 338aa MW: 35841.4 Da PI: 9.0858

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62003833-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125	2.3e-39	43	101	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++l+cprCdstntkfCyynny+l+qPr+fCk+CrryWtkGG+lrnvP+Ggg+rknk++ AUR62003833-RA 43 QQNLRCPRCDSTNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGTLRNVPIGGGCRKNKST 101 7899****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MDRGRRSENY GGGFTGVGGA RGHGGFHRGG CCRVFHGEAN ASQQNLRCPR CDSTNTKFCY 60 YNNYNLTQPR HFCKTCRRYW TKGGTLRNVP IGGGCRKNKS TTVSGSSTPS GLVKSSSNAM 120 AKAKATLSTE LLVNGNPGFL GSGLLDHLHH HPDLQSGCSN PILWPSLQPN SHILSLLRGS 180 NQFHNPNPIS SGFSHVKTED GATTTTNIGL DSYGNGSQSG IGSFQRNNQH QANGFSSGVV 240 PDFMQNNGSN SNILELYQRL KSSSNYNSYC GNENQGTVIL GNMVGSASPS SPMHSTILDS 300 APVGGGDHNY GGYSFMSSPA MSGWSDYPIG PVNGAYP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	3e-33	Dof family protein