PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62003828-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Dof

Protein Properties

Length: 559aa MW: 59102.2 Da PI: 9.052

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62003828-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	117.1	7.2e-37	25	85	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++ l+cprC stntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rk k+s AUR62003828-RA 25 QQDPLPCPRCTSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKTAKRS 85 567899**************************************************98765 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MPTEAAERRA VRAQQMGAPL PPVEQQDPLP CPRCTSTNTK FCYYNNYNFS QPRHFCKSCR 60 RYWTHGGTLR DIPVGGGSRK TAKRSRTSSS LVTSSTSTSS GVSIGPGLEP IPVSHQATPV 120 YVTLPSTTVG GGGFTSLLSS GGPGGILADR ILEYRGESQS LDQCNRLFDS SVSNNTFELD 180 ASRILQELGG ISTSMERQKV TLHELMGGVK EMLRNAEIAI RSFMILRPRF LHQKGGTASN 240 TTASAQTPGT STTPGGSSQA AASSMVPVND FYSGVPKKPS PFMQQTVARF EKYIGECRQW 300 IEELEQLLLS DSDRNSITLN SSVLQSFPKV LTNVHEFFVH VAAKVESIHQ YIESMRTAYL 360 ADQRRRGDVG DPFLEADRRE VARQEAAAKR VHPTLHLPAA PQPTTQVAGL FASSGAPGVS 420 TAPQTSGAPV SSSAGTGFSL FGATPASTSS SSLFSTPASA SGGLFSTSMA SPQTSLFPSS 480 SPAFPSASTA SLFGGSAPAS APAGNSLFST PFGSGSALGS GSSFGATNIS YRFLKSFVKC 540 LISDYSLLNL WESWTPGC*

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MPTEAAERRA VRAQQMGAPL PPVEQQDPLP CPRCTSTNTK FCYYNNYNFS QPRHFCKSCR  60
RYWTHGGTLR DIPVGGGSRK TAKRSRTSSS LVTSSTSTSS GVSIGPGLEP IPVSHQATPV  120
YVTLPSTTVG GGGFTSLLSS GGPGGILADR ILEYRGESQS LDQCNRLFDS SVSNNTFELD  180
ASRILQELGG ISTSMERQKV TLHELMGGVK EMLRNAEIAI RSFMILRPRF LHQKGGTASN  240
TTASAQTPGT STTPGGSSQA AASSMVPVND FYSGVPKKPS PFMQQTVARF EKYIGECRQW  300
IEELEQLLLS DSDRNSITLN SSVLQSFPKV LTNVHEFFVH VAAKVESIHQ YIESMRTAYL  360
ADQRRRGDVG DPFLEADRRE VARQEAAAKR VHPTLHLPAA PQPTTQVAGL FASSGAPGVS  420
TAPQTSGAPV SSSAGTGFSL FGATPASTSS SSLFSTPASA SGGLFSTSMA SPQTSLFPSS  480
SPAFPSASTA SLFGGSAPAS APAGNSLFST PFGSGSALGS GSSFGATNIS YRFLKSFVKC  540
LISDYSLLNL WESWTPGC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66940.1	5e-33	Dof family protein