PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62003777-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 390aa MW: 44744.3 Da PI: 7.3269

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62003777-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.8	2.4e-20	82	179	3	90
FAR1 3 YneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 Y+++A +GF vr+s+++++ ++ +++ ++fvCskeg+r + k++ ++k++r+ + trtgCka ++ kk+k+g +ev++ + +HnH AUR62003777-RA 82 YKKHAFVIGFGVRQSTTRYTqTEPKKVRGKDFVCSKEGFRVKPKNQktptpipgqKQKKKRQVPITRTGCKAFIRAKKNKEGMFEVEEHVMQHNH 176 99**********998887366788999*******99988889**989999999****************************** PP FAR1 88 ela 90 el+ AUR62003777-RA 177 ELT 179 *97 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MTEELQNFPE SQESMEIEQI GDSLLNLEIE EGEKIQQNDE IQDLSGSTLT DDARYTEQHD 60 IDYTGSLVGF TAATLEEIFE EYKKHAFVIG FGVRQSTTRY TQTEPKKVRG KDFVCSKEGF 120 RVKPKNQKTP TPIPGQKQKK KRQVPITRTG CKAFIRAKKN KEGMFEVEEH VMQHNHELTR 180 REWQHLQRSE RKITEDKAKV IDIMAESGLR PAESYCLMAY EAGGENVLAH TMKDHFNYIT 240 RKKIMEIEGG FKANKITSLT DFFKIFKQTV TRWRNNESDA DFKCSNSKPT SNLPFYGMIK 300 HATEEEEDAA SQESESMQQN NTTATTETEE QIPTVMDPER ENTKGRSKRI KGHFEKGKQG 360 NKKKTKAMTT KGDTREFGII TPIQNPKLF*

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MTEELQNFPE SQESMEIEQI GDSLLNLEIE EGEKIQQNDE IQDLSGSTLT DDARYTEQHD  60
IDYTGSLVGF TAATLEEIFE EYKKHAFVIG FGVRQSTTRY TQTEPKKVRG KDFVCSKEGF  120
RVKPKNQKTP TPIPGQKQKK KRQVPITRTG CKAFIRAKKN KEGMFEVEEH VMQHNHELTR  180
REWQHLQRSE RKITEDKAKV IDIMAESGLR PAESYCLMAY EAGGENVLAH TMKDHFNYIT  240
RKKIMEIEGG FKANKITSLT DFFKIFKQTV TRWRNNESDA DFKCSNSKPT SNLPFYGMIK  300
HATEEEEDAA SQESESMQQN NTTATTETEE QIPTVMDPER ENTKGRSKRI KGHFEKGKQG  360
NKKKTKAMTT KGDTREFGII TPIQNPKLF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-14	FAR1 family protein