PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62003689-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 869aa MW: 95389.4 Da PI: 7.0831

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62003689-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.3	8.6e-07	32	106	14	88
FAR1 14 vrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetr.tgCkaklkvkkekdgkwevtkleleHnHe 88 v++ + + +++++ ++ + C + g r++++k++ +r++++++r ++C ++ kke +++w+++ + eHnHe AUR62003689-RA 32 VSQGYVLTIRKSKRDINVVLGCDRGGGRRNRHKSEAPKRKRKENSRlINCPFEIIGKKE-EDVWVLKIRNGEHNHE 106 4444444445555668999******99999996666655554443899988888.9*************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 869 aa Download sequence
MESVQPNVMC PPPPRTFKDR EELITYVRDF GVSQGYVLTI RKSKRDINVV LGCDRGGGRR 60 NRHKSEAPKR KRKENSRLIN CPFEIIGKKE EDVWVLKIRN GEHNHEPLKD MSEHRFSRRF 120 NEEEARQVKE MIEAGIKPRQ VLETLKQSNP QLQSTPRHLY NLKTKIREGN FSERSFKSWR 180 PNASSVGTSS DIVEQMKVSN LIGGKFVESQ GVVFVDVINP ATQEVVSQVP STTFEEFKAA 240 VFSAKEAFPL WKNTPVFTRQ RIMMKLQELI HRDKEKLALI INTEQGKTTK SAHADILHWE 300 PLGVCAGICN SNFSSMVPLR MFLVAVTCGN TFVLKPSEKN PGASMKLAAL AIEAGFPNGV 360 LNIVHGGNDI VNYVCDDDDI KSISCVGAYK DCMDIYAKAT VRGKRVEMAS FLGPGHIWEK 420 ELVKRAKTLT VSGGTDTGAD VGPVLSKEVK DGICRSVQTA VESGARLILD GRDIMVPGYE 480 GGNFVGPTIL SDVTASMECF KEDIFGPVLL CTQVHSLEDA VAIINRHKFG NGASIFTTSG 540 IAARKFQNIV EVGLIGINVP VPFPLTNSSA GSTESYAGNI NFHGKAGIHF YTQVKIVAQQ 600 WRDLTSKGIL SSKTLTSEEG ASNQADLPVT VSSSSDTDSF SHEPSDSVPK SSREITDLNR 660 PVNGPSIQND LSCTATSMSF ASTSGVNIPQ TSTFTEVYPS TTQGLDNLAM DLSAERGNLS 720 MESHRNNLDP QLLVTSESSY MSMVSHEMGL IYESERAYTA AATISEQMSV PTMSVKIEPT 780 PRLSHMPAMP PRACVHPMVG DTSHETHDQA PSSVLRTIES VMIEPANQRL SYMPTMPQRA 840 CDLNPVVGDI SHDQAPSSVL PSCERRNF*

Sequence ? help Back to Top

Protein Sequence Length: 869 aa Download sequence

MESVQPNVMC PPPPRTFKDR EELITYVRDF GVSQGYVLTI RKSKRDINVV LGCDRGGGRR  60
NRHKSEAPKR KRKENSRLIN CPFEIIGKKE EDVWVLKIRN GEHNHEPLKD MSEHRFSRRF  120
NEEEARQVKE MIEAGIKPRQ VLETLKQSNP QLQSTPRHLY NLKTKIREGN FSERSFKSWR  180
PNASSVGTSS DIVEQMKVSN LIGGKFVESQ GVVFVDVINP ATQEVVSQVP STTFEEFKAA  240
VFSAKEAFPL WKNTPVFTRQ RIMMKLQELI HRDKEKLALI INTEQGKTTK SAHADILHWE  300
PLGVCAGICN SNFSSMVPLR MFLVAVTCGN TFVLKPSEKN PGASMKLAAL AIEAGFPNGV  360
LNIVHGGNDI VNYVCDDDDI KSISCVGAYK DCMDIYAKAT VRGKRVEMAS FLGPGHIWEK  420
ELVKRAKTLT VSGGTDTGAD VGPVLSKEVK DGICRSVQTA VESGARLILD GRDIMVPGYE  480
GGNFVGPTIL SDVTASMECF KEDIFGPVLL CTQVHSLEDA VAIINRHKFG NGASIFTTSG  540
IAARKFQNIV EVGLIGINVP VPFPLTNSSA GSTESYAGNI NFHGKAGIHF YTQVKIVAQQ  600
WRDLTSKGIL SSKTLTSEEG ASNQADLPVT VSSSSDTDSF SHEPSDSVPK SSREITDLNR  660
PVNGPSIQND LSCTATSMSF ASTSGVNIPQ TSTFTEVYPS TTQGLDNLAM DLSAERGNLS  720
MESHRNNLDP QLLVTSESSY MSMVSHEMGL IYESERAYTA AATISEQMSV PTMSVKIEPT  780
PRLSHMPAMP PRACVHPMVG DTSHETHDQA PSSVLRTIES VMIEPANQRL SYMPTMPQRA  840
CDLNPVVGDI SHDQAPSSVL PSCERRNF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	68	74	PKRKRKE