PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62003534-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 796aa MW: 91634.2 Da PI: 7.309

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62003534-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.6	6.8e-26	89	190	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkekdgkwevtklele 84 fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g+++e +k e++ +r+ +t+Cka+++vk++ dg+w+++++ +e AUR62003534-RA 89 FYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKGnrprirqcnkqePESATGRRSCGKTNCKASMHVKRRPDGRWVIHSFIKE 183 9************************************999998889999999775555555589999********************** PP FAR1 85 HnHelap 91 HnHel p AUR62003534-RA 184 HNHELLP 190 **975 PP

Sequence ? help Back to Top
Protein Sequence Length: 796 aa Download sequence
MDIDLRLPSG EEEDRQDEDL TTDSNLLDRE DRLDNSGDAE TVLVVPDVHA EEELALNSIT 60 PDLVEYKEDV NLEPLHGMEF VSHQEAYAFY QEYARSMGFN TAIQNSRRSK TSREFIDAKF 120 ACSRYGTKRE YDKGNRPRIR QCNKQEPESA TGRRSCGKTN CKASMHVKRR PDGRWVIHSF 180 IKEHNHELLP AQAVSEQTRK MYAAMARNYA EYKNVVGLKN DAKIPFDKNR NLLLEAGDAK 240 LLLDFFTQMQ NVNSNFFYAV ELSDDLRLKK NLGHIIKKHE NFMAKFDKCI YRSWSDEEFE 300 KRWEKLVVRF ELNKDDEWIR SLYDDRKLWV PTYMKDSFLA GMSVVQRSES VNSYFDKYVH 360 KKTTVSDFIK QYDTIIQDRY EEEARADSDT LNKQPALKSP SPFEKHMSTL YTHAMFKKFQ 420 VEVLGAVACH PKRERQDELI ITFKVQDFEK NQDFVVTWNE MKSEVSCICH LFEYKGFLCR 480 HAMIVLQICG LSMIPPQYIL KRWTKDAKER HLMGEVMEQV PSRVQRYNHL CNRAMKLSEE 540 GSLSQESYNL ALRALDEAYT NCIGVNDACK THMEVGTSAT HGLLSIEDGS PSRSFSKATK 600 KKNPTKKRKM NTEAEAMAIG SQDGLQQMDK LGSRPVTTLD GFYGTQPGVQ GMVQLNLMAP 660 TRENYYGNPA AIQGLGQLNS IAPSHEGYYG QQSMHGLGQM DFFRTPTGFP YGIRRPMSGL 720 HNCMTMELDI LKRYPLPFRP IKIAHSGDWS MKGLMEIGKC AYLELKIEAP LDVVQFERCT 780 EMACSFLMSV KYGRQ*

Sequence ? help Back to Top

Protein Sequence Length: 796 aa Download sequence

MDIDLRLPSG EEEDRQDEDL TTDSNLLDRE DRLDNSGDAE TVLVVPDVHA EEELALNSIT  60
PDLVEYKEDV NLEPLHGMEF VSHQEAYAFY QEYARSMGFN TAIQNSRRSK TSREFIDAKF  120
ACSRYGTKRE YDKGNRPRIR QCNKQEPESA TGRRSCGKTN CKASMHVKRR PDGRWVIHSF  180
IKEHNHELLP AQAVSEQTRK MYAAMARNYA EYKNVVGLKN DAKIPFDKNR NLLLEAGDAK  240
LLLDFFTQMQ NVNSNFFYAV ELSDDLRLKK NLGHIIKKHE NFMAKFDKCI YRSWSDEEFE  300
KRWEKLVVRF ELNKDDEWIR SLYDDRKLWV PTYMKDSFLA GMSVVQRSES VNSYFDKYVH  360
KKTTVSDFIK QYDTIIQDRY EEEARADSDT LNKQPALKSP SPFEKHMSTL YTHAMFKKFQ  420
VEVLGAVACH PKRERQDELI ITFKVQDFEK NQDFVVTWNE MKSEVSCICH LFEYKGFLCR  480
HAMIVLQICG LSMIPPQYIL KRWTKDAKER HLMGEVMEQV PSRVQRYNHL CNRAMKLSEE  540
GSLSQESYNL ALRALDEAYT NCIGVNDACK THMEVGTSAT HGLLSIEDGS PSRSFSKATK  600
KKNPTKKRKM NTEAEAMAIG SQDGLQQMDK LGSRPVTTLD GFYGTQPGVQ GMVQLNLMAP  660
TRENYYGNPA AIQGLGQLNS IAPSHEGYYG QQSMHGLGQM DFFRTPTGFP YGIRRPMSGL  720
HNCMTMELDI LKRYPLPFRP IKIAHSGDWS MKGLMEIGKC AYLELKIEAP LDVVQFERCT  780
EMACSFLMSV KYGRQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein