PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003373-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WOX
Protein Properties Length: 266aa    MW: 29426.2 Da    PI: 5.0428
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003373-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox222.8e-073678238
                    T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....T CS
        Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....g 38
                    ++R+t+t+eq++ L+el++    r p+a++++ + ++l    g
  AUR62003373-RA 36 STRWTPTTEQIKLLKELYYIngVRSPTADQIQSICARLrrngG 78
                    58****************95459***********999955555 PP
2Wus_type_Homeobox48.81.7e-163578244
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGk 44
                       ++tRWtPt+eQik+L+ely+ +G+r+P++++iq i a+L++ G 
     AUR62003373-RA 35 SSTRWTPTTEQIKLLKELYYiNGVRSPTADQIQSICARLRRNGG 78
                       789****************99*******************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MESQQQDEMN MNLNCGKMTN NNITNTSNNY LCRQSSTRWT PTTEQIKLLK ELYYINGVRS  60
PTADQIQSIC ARLRRNGGLT WKQDHQDITL HANKYPCTIN NPGVSCSSSS NGQEIPGGGQ  120
LMGGFGYGAV NMENKFRDCS ISGGIFNGGN HVNQWTAVGA NYSPYAPASY ANLLDKISTI  180
DEDPYIDQDH YGSETPEIET LPLFPMHNEE LDHDHDHNHG FYTIKPPSDG GYYTGGYRWS  240
NGSGGNTSLE LSLNSYGYGY YSPNI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.15e-21WOX family protein