PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003250-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 266aa    MW: 30468.8 Da    PI: 9.2492
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003250-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.21.2e-123712599
                    TT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3 25 ehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                    +hg++   s  + l+ ++g++We++l   +  ++ +l+kGW +Fv+   L+++  ++Fk++g+s+f   v vf++
  AUR62003250-RA  3 KHGKD--LSNVIYLNIPTGKVWEFNL--VRENDKAFLQKGWPKFVQFYSLNDKHCLMFKYKGNSQF--DVIVFDT 71
                    55544..777899999**********..77778899**************************9999..7777775 PP
2B3604.2e-19146246199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     f + + ps v+++  + +pk+fa ++ ++++++ t  l++ +g+ W v+ +      +k  + + ++GW++Fv  n+Lk+gD+++F+l++++ef 
  AUR62003250-RA 146 FATNMYPSFVGSKFAMGIPKTFAHKFLHNEPCPGTFNLQTDTGKAWPVRSCAsvgnYGKTTMKLQGAGWRKFVLGNNLKVGDICIFELIKKQEF- 239
                     6778999****************99999999*******************77765333333355569*********************997777. PP

                     .EEEEE-S CS
              B3  92 lvvkvfrk 99 
                      +++++r+
  AUR62003250-RA 240 -KIHIIRA 246
                     .8888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MNKHGKDLSN VIYLNIPTGK VWEFNLVREN DKAFLQKGWP KFVQFYSLND KHCLMFKYKG  60
NSQFDVIVFD TSASEIEYPF DPEPCRENNP LQNRKTNNSS ETAQSMQSVT FDKLIISYNR  120
SYSAFGPEEK KRVRDYYSDH CKHPSFATNM YPSFVGSKFA MGIPKTFAHK FLHNEPCPGT  180
FNLQTDTGKA WPVRSCASVG NYGKTTMKLQ GAGWRKFVLG NNLKVGDICI FELIKKQEFK  240
IHIIRAPYAK EKLENIPAII EVESD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.11e-16B3 family protein