PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62002902-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bZIP

Protein Properties

Length: 447aa MW: 49821 Da PI: 6.705

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62002902-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.4	4.1e-10	160	198	4	39
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLe 39 k rr+++NReAAr+sR+RKka++++Le k ++Le AUR62002902-RA 160 QKTLRRLAQNREAARKSRLRKKAYVQQLESsrlKLAQLE 198 5788************************98333344444 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MQSFRELYYH SPYIFRGDES NTRNIGELEH PVVFHQQDAV DLSRSGLCGL RSNNIAFPSS 60 LPFEAANANN YLSATPTTAA TVTVANTRVV EAGEVVVEKR GVVGNRQLEY WGESGAMADT 120 SQQTDTSTDV DTDDRNQYRV IQNGAVVDST DQSKGKTDDQ KTLRRLAQNR EAARKSRLRK 180 KAYVQQLESS RLKLAQLEQE LERARQQGFM VSSVGSEPGH SLGTNGVVAF DVHYGNWLDK 240 HQRLINDTRS ALNSHVCDDE LRVLVDSLMS HYDELFRIKA IGAKADIFHL LSGMWQTPAE 300 RCFMWLGGFR SSELLKILVN HLEPLTEQQL LGVCNLQQSS QQAEDALSQG MEALQQSLVD 360 TLSANCLSPT NTGVVADYMG QMAIAMGKLA TLENFVHQAD LLRQQTLQQL HRILTTRQAA 420 RALLVIHDYT TRLRALSSLW LARPKS*

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MQSFRELYYH SPYIFRGDES NTRNIGELEH PVVFHQQDAV DLSRSGLCGL RSNNIAFPSS  60
LPFEAANANN YLSATPTTAA TVTVANTRVV EAGEVVVEKR GVVGNRQLEY WGESGAMADT  120
SQQTDTSTDV DTDDRNQYRV IQNGAVVDST DQSKGKTDDQ KTLRRLAQNR EAARKSRLRK  180
KAYVQQLESS RLKLAQLEQE LERARQQGFM VSSVGSEPGH SLGTNGVVAF DVHYGNWLDK  240
HQRLINDTRS ALNSHVCDDE LRVLVDSLMS HYDELFRIKA IGAKADIFHL LSGMWQTPAE  300
RCFMWLGGFR SSELLKILVN HLEPLTEQQL LGVCNLQQSS QQAEDALSQG MEALQQSLVD  360
TLSANCLSPT NTGVVADYMG QMAIAMGKLA TLENFVHQAD LLRQQTLQQL HRILTTRQAA  420
RALLVIHDYT TRLRALSSLW LARPKS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68640.1	1e-117	bZIP family protein