PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62002424-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 686aa MW: 79335.8 Da PI: 6.5444

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62002424-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72	1.4e-22	67	158	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GFs+rk++s++s++ g +++r+fvC+++g+++++kk ++++ r r++ r+gC+akl ++ke +w+v+++++ HnHel AUR62002424-RA 67 EYYINFARRNGFSIRKARSTESHNLG-VYRRDFVCYRSGFNQPRKKVNVEHPRDRKSVRCGCDAKLYLTKEIvncVTQWYVSQFSNVHNHELL 158 59******************7777.**************************************99877889************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MKPANNIWIQ KEQCPCGDWK CFIKYEGEEQ GQACQPTKNG TSLSSSSEVV FAPYVGQIFK 60 SDDEAFEYYI NFARRNGFSI RKARSTESHN LGVYRRDFVC YRSGFNQPRK KVNVEHPRDR 120 KSVRCGCDAK LYLTKEIVNC VTQWYVSQFS NVHNHELLED DQVRLLPAYR KIQEADQERI 180 ILLSKAGFPV NRIIKILELE KGVQPGQLPF IEKDIRNFLR NCKKTVQEND ALLTEKRITD 240 MMELLEACKA MAERDEDFIF DFLTDANGKV ENIAWSYGDS VRAFNLFGDA VQFDITYQSI 300 TYGMLLGLLS GIDNHGKPIV FACALVQEEN PHAIVWALQT VVRFMRGRPQ TIVTDLEPGL 360 RDSIVSEMPN TKHVISLWYI MSKLSSWFSL PLGLKYSEFK SEFEMVCYVE STEDFGHLWS 420 HLITKFGLGS DKHISLLWSC RACWAFSFIK DCFVARITTA EYMRSVDSFL KGVLNEQTCL 480 QVFFEQVGLA AKLGYGAKED LPFVHLKTCM PVEEHAQGIL TPYAFSVYQH ELVLSVQYAI 540 IEMAKGSYVA RHYKKVEEEY LLLWIHEGEQ IHCSCKGFEQ SGVLCRHALR LFVTKNYFQL 600 PYHYFPIRWR WENSFLPMDQ ESSRLVKEEY YRALHSLTDT LLTESLVSKE RFNYAHKELT 660 ALLDQIKNMH VDEVPEILTN NFSES*

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MKPANNIWIQ KEQCPCGDWK CFIKYEGEEQ GQACQPTKNG TSLSSSSEVV FAPYVGQIFK  60
SDDEAFEYYI NFARRNGFSI RKARSTESHN LGVYRRDFVC YRSGFNQPRK KVNVEHPRDR  120
KSVRCGCDAK LYLTKEIVNC VTQWYVSQFS NVHNHELLED DQVRLLPAYR KIQEADQERI  180
ILLSKAGFPV NRIIKILELE KGVQPGQLPF IEKDIRNFLR NCKKTVQEND ALLTEKRITD  240
MMELLEACKA MAERDEDFIF DFLTDANGKV ENIAWSYGDS VRAFNLFGDA VQFDITYQSI  300
TYGMLLGLLS GIDNHGKPIV FACALVQEEN PHAIVWALQT VVRFMRGRPQ TIVTDLEPGL  360
RDSIVSEMPN TKHVISLWYI MSKLSSWFSL PLGLKYSEFK SEFEMVCYVE STEDFGHLWS  420
HLITKFGLGS DKHISLLWSC RACWAFSFIK DCFVARITTA EYMRSVDSFL KGVLNEQTCL  480
QVFFEQVGLA AKLGYGAKED LPFVHLKTCM PVEEHAQGIL TPYAFSVYQH ELVLSVQYAI  540
IEMAKGSYVA RHYKKVEEEY LLLWIHEGEQ IHCSCKGFEQ SGVLCRHALR LFVTKNYFQL  600
PYHYFPIRWR WENSFLPMDQ ESSRLVKEEY YRALHSLTDT LLTESLVSKE RFNYAHKELT  660
ALLDQIKNMH VDEVPEILTN NFSES*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein