PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001964-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family G2-like
Protein Properties Length: 310aa    MW: 34100.7 Da    PI: 7.0058
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001964-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.45.8e-32178233156
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                     k r++W+peLH+rFv+a+e+LGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  AUR62001964-RA 178 KRRRCWSPELHRRFVDALESLGGAQVATPKQIKELMKVDGLTNDEVKSHLQKYRLH 233
                     689***************************************************97 PP
2Myb_DNA-binding42.81.2e-13180231148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W++e++ ++vda + lGg    t+k I + m   g+t  ++ks++qky+
   AUR62001964-RA 180 RRCWSPELHRRFVDALESLGGAqvaTPKQIKELMKvDGLTNDEVKSHLQKYR 231
                      568*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MASNFPQLSL ELSLPNSSDV LTRFLVAGIS DLGELSKLNG FIVCLEDELK KIQAFHRELP  60
LSSVILNDAI SKLKEVAKKS EEKQFEKKTW MSTAQLWSSA TEGGGDYEPH KNEGKEAILS  120
FEKKVREDVT GLSLVPPGLN TPTEVVEPGS AKLRTGGIFS GSVFAKPAIK PSYQTTRKRR  180
RCWSPELHRR FVDALESLGG AQVATPKQIK ELMKVDGLTN DEVKSHLQKY RLHVRKLPAA  240
SITNQLTTDV GIDCGDQLEL GCLTTDLQHS GSPKGPLHLG ESRKCNSSSV EEDEEEKSDG  300
QSWKVQHHI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177181RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.15e-44G2-like family protein