PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001941-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 853aa    MW: 97448.2 Da    PI: 9.5316
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001941-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.34.3e-111232011094
                     HHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3  10 vlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     + + g+l lp +f+++       e+  ++le+e g ++e+k+      ++  l++GW++F  + +L++gD +vF+l++ ++f+ ++
  AUR62001941-RA 123 YISGGLLPLPTPFCRALlP---LEDAIVILETEIGVQYEIKY--LA--QHLRLSGGWRKFSMDMKLEAGDAIVFHLVEATKFKILF 201
                     45668899******99853...34567***************..44..4567************************9988887665 PP
2B348.71.4e-15487570190
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f k l++s+v+   r+ lp +f+++h   + +++ +tle+++ + ++ k+ +rk++    l++GWk+F+ + +L +gD++vF+l+ + +f
  AUR62001941-RA 487 FAKSLVKSHVTGGFRMGLPAPFCQKHL--PSKDTIITLETQHKKLYKTKYLVRKTG----LSGGWKGFAISERLLVGDVLVFQLIADAKF 570
                     889***********************5..235678***************777777....***********************9987665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 853 aa     Download sequence    
MSMKLEEGDA IVLHLVEATK FKAYIIRVNS ANEVNLPVHV FNLVSRVKRS VSSKADRNQL  60
CIYRRGEVQE YLQGKQREFK ADKIRGNDMR VSQVLRKSHL IQGIHSKLIV EHSVTVKWLV  120
KSYISGGLLP LPTPFCRALL PLEDAIVILE TEIGVQYEIK YLAQHLRLSG GWRKFSMDMK  180
LEAGDAIVFH LVEATKFKIL FSNIKSFEEF KAAIHELIQN HELPYYALQE YYELCCSQNA  240
FLHADLFRGI NTRVYNQIIV RAIRKANAFS TCKFSTFLHK YELWDKALKT FDALGKNVSF  300
LRARLHHLKN LAVSSEDAAD RSRYEVACHE RGRAKGEVRK LELILAKLQA LKSNPFKDKH  360
REGNSWLEDV KAEISNLEGL IAELGEFFSQ YDAHIETLKL KAKAHEVKFQ EEEETSKERK  420
SKRKYVKRTW SRCSLSSSDI SGLWHQHRKP KRCKLNVEKN LNVKSKSFVA TQAEELRSKL  480
DPRYPSFAKS LVKSHVTGGF RMGLPAPFCQ KHLPSKDTII TLETQHKKLY KTKYLVRKTG  540
LSGGWKGFAI SERLLVGDVL VFQLIADAKF KSDNFTRGAR KCIDSPQVDQ RSMQPPEYSE  600
SNSTENSFRS RVADGFPICE EAALSPSAVS TFDNFSIVIN DLLKDYELPR HIKWSYYKLC  660
CSQDSLLHAN LPHWMNHILI GGVIIETVTI ADALRQCDLS TSKEEFAIWD KTLSALELLG  720
MNNGFLRSHL HHLQRIVHDP EVATFKQRCL ELCSENSRAE DEIRSLTARL AELKKVHKKR  780
AADIDNLKSK INNHELKFQE QIHRNDSDRS EVWFACGGTA AGRDCGGLSF SMSCICIAKA  840
ILHFGNVSGL VYQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.18e-32B3 family protein