PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001766-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 714aa    MW: 80129.9 Da    PI: 5.8389
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001766-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS349.55.2e-1072996551359
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+av+s dl+ a++ L+++++++sp+gd++qRla+yf+++L+arla+++s++++ +   + s   ss  l+a+++++ + P  ++s+
  AUR62001766-RA 299 LRTLLTQCAQAVASFDLRSANERLKQIRQHSSPYGDNIQRLAQYFANGLEARLAGTGSTMSANIVDARIS---SSGFLKAYRAYVTAVPAKRMSF 390
                     6789***************************************************999999888777776...899******************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++aN++Il+ +e+++++HiiDf++  GlQWp+L+q La+Rp+gpp+lRiTg++ p++g   +e++e+tg+rLa ++e+++vpf+++  +a+++++
  AUR62001766-RA 391 FLANNTILKLAEKATTIHIIDFGVLLGLQWPCLIQNLAKRPGGPPKLRITGIDYPQQGfrPAERVEATGRRLAGYCERFDVPFQYQS-IAQKWNT 484
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++l++ ++  +E ++Vn++++  +llde+v+ +s++d++Lklvk+++P+++++   +  +n++ F +rf eal +ysa+fd +e++lpr+++er 
  AUR62001766-RA 485 IQLQDVKIGGDELVIVNCMFRSVSLLDETVEADSQKDAFLKLVKQINPRLFIHGVVNGTYNAPFFITRFREALFHYSAIFDIFEETLPRDDHERL 579
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv 359
                      vE e+ g+e+ nv+acegaer++r et+++W+ r  +aGFk++pl+ + +  ak++++  + + + v+e++++++
  AUR62001766-RA 580 LVESEVYGKEAFNVIACEGAERTHRPETYKQWQVRTVRAGFKQLPLDRELVGRAKAMVKANYHKDFVVDEDRNWML 655
                     **************************************************************888********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 714 aa     Download sequence    
MYPVLVDPEL VSHEFKFNPN LISNVNTHQN FGNGISQGEI FGNDDLVDKK PSLVDFNKGF  60
INSDVPDFSD ACLKFLSDIL LEENLDEIPA TVQDYRALQA TEKSLYDALV EEYSPSNKPT  120
SCLDQSIENP DDVLGRCWDN SFGVESNWVQ SQTPSEPFLS LDDLSQSFLE LNSQSSGSSN  180
SDDCKDGAAT SPASTISSLA PEKGVKVMSK PRRKKNHKRD DGSYGGGRSN KHQASSNEDY  240
VEMKQYDDIL LCKEDKDDLA VGNNESSATD MSKKLQGKGE KGKTTRGKKH NNIVEEVDLR  300
TLLTQCAQAV ASFDLRSANE RLKQIRQHSS PYGDNIQRLA QYFANGLEAR LAGTGSTMSA  360
NIVDARISSS GFLKAYRAYV TAVPAKRMSF FLANNTILKL AEKATTIHII DFGVLLGLQW  420
PCLIQNLAKR PGGPPKLRIT GIDYPQQGFR PAERVEATGR RLAGYCERFD VPFQYQSIAQ  480
KWNTIQLQDV KIGGDELVIV NCMFRSVSLL DETVEADSQK DAFLKLVKQI NPRLFIHGVV  540
NGTYNAPFFI TRFREALFHY SAIFDIFEET LPRDDHERLL VESEVYGKEA FNVIACEGAE  600
RTHRPETYKQ WQVRTVRAGF KQLPLDRELV GRAKAMVKAN YHKDFVVDED RNWMLQALDP  660
PSMDLLHFCG FNKPPDEQRD IAHCKFHTWN HCSSELQAPE DDLHNCRQHG HAA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.11e-158GRAS family protein