PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62001010-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bZIP

Protein Properties

Length: 407aa MW: 43222 Da PI: 5.9478

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62001010-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.4	1.1e-16	200	252	3	55
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 ++kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L +eN++L k+l ++++ AUR62001010-RA 200 DVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLLKRLTDISQK 252 689****************************************9888877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MNRSASEWAF ERFLQETSPI SDSSSSKSMA ENDAVEIKDP PISAAASGTA ATSVTAATTA 60 DVTSKYNNLG AQSLGNGTTS LNRQGSSVVP IDSDDYHAVL KNKLNLACAA VALTGAPFVM 120 NHNSAVAAEN VKQGTADSRP ASIPPCKGSL DKDSKPIGIL SPPALPKKPV VQANQTTSYD 180 SDQSDDDDLE GETDNMDPAD VKRVRRMLSN RESARRSRRR KQAHLTELET QVSQLRGENS 240 SLLKRLTDIS QKFNDAAVDN RVLKADVETL RAKVKMAEET VKRVTGMNPL LQAMSEITAM 300 GMGPFGGSPC PSDSADAAVP VQDDPKQTHY YQPVDNPLPA SHPRADNGVT DISSIDDVLQ 360 NAATQVLGGS KIARTSSMQR VASLEHLQKR IRGGMDQGSP HGGADQ*

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MNRSASEWAF ERFLQETSPI SDSSSSKSMA ENDAVEIKDP PISAAASGTA ATSVTAATTA  60
DVTSKYNNLG AQSLGNGTTS LNRQGSSVVP IDSDDYHAVL KNKLNLACAA VALTGAPFVM  120
NHNSAVAAEN VKQGTADSRP ASIPPCKGSL DKDSKPIGIL SPPALPKKPV VQANQTTSYD  180
SDQSDDDDLE GETDNMDPAD VKRVRRMLSN RESARRSRRR KQAHLTELET QVSQLRGENS  240
SLLKRLTDIS QKFNDAAVDN RVLKADVETL RAKVKMAEET VKRVTGMNPL LQAMSEITAM  300
GMGPFGGSPC PSDSADAAVP VQDDPKQTHY YQPVDNPLPA SHPRADNGVT DISSIDDVLQ  360
NAATQVLGGS KIARTSSMQR VASLEHLQKR IRGGMDQGSP HGGADQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	215	222	RRSRRRKQ
2	217	222	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	1e-61	bZIP family protein