PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62000969-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GeBP
Protein Properties Length: 311aa    MW: 33750.4 Da    PI: 6.1022
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62000969-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573120.21.1e-37121219297
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 
                     lfqrlw++eDei lLqG++d+++++g+     ++d+ afy+++k++++++++k+qlveK+rrLKkK+++  +k++sgke++f+++hdq +fels+
  AUR62000969-RA 121 LFQRLWTDEDEIELLQGFLDYTSSRGTtssGHHHDTAAFYDQIKSKLQLEFNKNQLVEKLRRLKKKYRNVISKMSSGKEFVFKSPHDQATFELSS 215
                     79************************97644566************************************************************* PP

          DUF573  94 kiWg 97 
                     kiW 
  AUR62000969-RA 216 KIWS 219
                     ***6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MASEEDHPIX XXXXXXXXXX XSEPLNDPGA PDDDVAVDSE SSSGEEDSTV AAVDSTAVTV  60
AIPSSVSAAV PAPNNNSANA VTIALPDPKR HRVDPLSSSS SLAVSPVVNP EKKPIDDSRR  120
LFQRLWTDED EIELLQGFLD YTSSRGTTSS GHHHDTAAFY DQIKSKLQLE FNKNQLVEKL  180
RRLKKKYRNV ISKMSSGKEF VFKSPHDQAT FELSSKIWSN ISPNFRGVAE FDDDDQNPNP  240
NLSTNFASAT PPRPPNSSFV ISHINLNNSA GGGGGGGTVS TPMMVDHKAV LLRNCRRGRG  300
LGWGRLRISM *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.23e-48GeBP family protein