PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62000285-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 632aa MW: 70398.1 Da PI: 6.8511

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62000285-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42	2.1e-13	580	627	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 r++WT+eE+e+l +avk +G + Wk+I k Rt ++k++w++ AUR62000285-RA 580 RKKWTPEEEEKLREAVKNHGRN-WKLIRDIYIdtfKERTNVDLKDKWRN 627 789***************66.**9999*************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 632 aa Download sequence
MDEKVAKWIL EFLLRKPIDE KIINGVLSSL PFSNKDCRLK KTILLRKIES ETSNGSVSEK 60 LLELLELIEE LNHRAGKTAS DLMKKAYCAV AVDCTVRFLE ENVEENGKYF EAVERIWRNR 120 ICKMEGLLSE ESNQWLADVE AAVWDASVCE KILMRNTRNE ALKAVRGYLK EAWKSMGPTF 180 LELVASKFGY EVEKLGFCED GGGDVVGSDN PCRELVAGQG GLPKGHTLVR RKHVAVKTRR 240 PRGAKISEGN EEAESSMNVV NNVPICELEK VQEALQSNSL QLHATVSDSH ADASRAAHTL 300 SCEDNVVLNH KTGEVQEALQ SNSLLQHASV SDSRAGASQA AHNLSCKDND VPIHKMDEVQ 360 EALQSNSLQP HTAVIDSCLD ASRDHNPSST KATDNVSNVN ASNKQTRPPV VHVTPEVRRV 420 QEALKTSSRE LHVSVTDPLP EALEIAKQTL PCTGAAGNHD TSHTTAVEKH DMNSDAVLPN 480 LTQSVIHAPR ETTENNTENV EKKDKLTGNA RGNETRTPKE RPKRKCSLME PNGTSHTYEW 540 DDSDDNVGRG GLSLPPSPKR SRVSALAPYA EKKSYSMRER KKWTPEEEEK LREAVKNHGR 600 NWKLIRDIYI DTFKERTNVD LKDKWRNMSR S*

Sequence ? help Back to Top

Protein Sequence Length: 632 aa Download sequence

MDEKVAKWIL EFLLRKPIDE KIINGVLSSL PFSNKDCRLK KTILLRKIES ETSNGSVSEK  60
LLELLELIEE LNHRAGKTAS DLMKKAYCAV AVDCTVRFLE ENVEENGKYF EAVERIWRNR  120
ICKMEGLLSE ESNQWLADVE AAVWDASVCE KILMRNTRNE ALKAVRGYLK EAWKSMGPTF  180
LELVASKFGY EVEKLGFCED GGGDVVGSDN PCRELVAGQG GLPKGHTLVR RKHVAVKTRR  240
PRGAKISEGN EEAESSMNVV NNVPICELEK VQEALQSNSL QLHATVSDSH ADASRAAHTL  300
SCEDNVVLNH KTGEVQEALQ SNSLLQHASV SDSRAGASQA AHNLSCKDND VPIHKMDEVQ  360
EALQSNSLQP HTAVIDSCLD ASRDHNPSST KATDNVSNVN ASNKQTRPPV VHVTPEVRRV  420
QEALKTSSRE LHVSVTDPLP EALEIAKQTL PCTGAAGNHD TSHTTAVEKH DMNSDAVLPN  480
LTQSVIHAPR ETTENNTENV EKKDKLTGNA RGNETRTPKE RPKRKCSLME PNGTSHTYEW  540
DDSDDNVGRG GLSLPPSPKR SRVSALAPYA EKKSYSMRER KKWTPEEEEK LREAVKNHGR  600
NWKLIRDIYI DTFKERTNVD LKDKWRNMSR S*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	3e-20	MYB_related family protein