PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62000230-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ARR-B
Protein Properties Length: 293aa    MW: 32835.4 Da    PI: 4.9311
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62000230-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like63.34.6e-20210262252
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmk..vkgLtlehvkSHLQk 52 
                      r+rW+ eLH  Fv +ve+LGG +kA+Pk+ile+++   + Lt+e+v+SHLQk
  AUR62000230-RA 210 SRVRWNDELHLDFVGVVESLGGVDKAVPKKILEMLSerHNNLTREQVASHLQK 262
                     59*********************************833579***********9 PP
2Myb_DNA-binding26.81.2e-08211263147
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg...kgRtlkqcksrwqky 47 
                      r rW  e+++ +v +v+ lGg     +k+I +++    +++t++q+ s++qk 
   AUR62000230-RA 211 RVRWNDELHLDFVGVVESLGGVdkaVPKKILEMLSerhNNLTREQVASHLQKQ 263
                      78******************77*****************************95 PP
3Response_reg64.36.1e-22581621106
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl+vdD+ + +  ++++l++ +y +v++  ++ eal+ll++++  +Dl+l+D++m ++dG++ll++  +++  +p+i+++++g+e+ +++ +  G
  AUR62000230-RA  58 VLVVDDDITCLTTITKLLSRCRY-QVTSKNNPIEALNLLEKNEekFDLVLTDVRMEEIDGFKLLETGVKHD--IPVIMMSGYGDEAIVKKGVTFG 149
                     89*********************.***************777777********************998877..********************** PP

                     ESEEEESS--HHH CS
    Response_reg  94 akdflsKpfdpee 106
                     a  ++ Kp++ ++
  AUR62000230-RA 150 ACNYFLKPISLSD 162
                     ********99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MSNEGVEKDN NNPSLVIPTP DFTMDMSNEE IVEKVVKENN NLANNSVVNP IVSKGLKVLV  60
VDDDITCLTT ITKLLSRCRY QVTSKNNPIE ALNLLEKNEE KFDLVLTDVR MEEIDGFKLL  120
ETGVKHDIPV IMMSGYGDEA IVKKGVTFGA CNYFLKPISL SDVEVIWQHV FRYNLEKCTR  180
GNKFDNENNE DQRDNKSKAI TKEGKKLTGS RVRWNDELHL DFVGVVESLG GVDKAVPKKI  240
LEMLSERHNN LTREQVASHL QKQMANSSIP ENATDPEALL LICNCTSELR PA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-46ARR-B family protein