PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62000125-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YA
Protein Properties Length: 305aa    MW: 32864 Da    PI: 6.6278
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62000125-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.86.7e-32177233158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq Rak+e e+kl +k rkpylheSRh+hAlrR+Rg+gGrF
  AUR62000125-RA 177 QEPVYVNAKQYHGILRRRQVRAKAELERKL-IKIRKPYLHESRHQHALRRARGTGGRF 233
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MPSKSILASQ PEPSSHTNTP PSAACSDQWW RGAGYGPLPF TDDAVGNVPK PTLLNHPVEM  60
SGSKDDQSLS NAGDDEEETS KDSETTGSTS TPRDGSCGHE LQKSQYGESG MSLGSADYYS  120
QHPQLELVGH SIACASTPYP DLYYGGMMAA YGSQPLVPPQ FYGMHQPRMP LPLEMAQEPV  180
YVNAKQYHGI LRRRQVRAKA ELERKLIKIR KPYLHESRHQ HALRRARGTG GRFAKKGEAE  240
GSSHSADEKN KSSDAGGSHS HEAHEERADI SNGSGGTRTG EGQSNQQWGS SMSSDQAPQC  300
ALAI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.13e-56NF-YA family protein