PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62000092-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Nin-like
Protein Properties Length: 275aa    MW: 30113.6 Da    PI: 8.7674
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62000092-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK56.55.6e-181458448
          RWP-RK  4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48
                    ++s+ed+ k Fslp+ +AA  Lgv+++vLK+iC ++G++RWPhRk
  AUR62000092-RA 14 SLSFEDVFKLFSLPLSEAADILGVSTSVLKKICNENGLERWPHRK 58
                    79******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MSSGQNQKSS IDHSLSFEDV FKLFSLPLSE AADILGVSTS VLKKICNENG LERWPHRKYL  60
AGKSIEDIKK EAAKEKNKAL RGVSSKSNVT TPSITTSIPG SLAKDNKNPK STPDISKSLG  120
NNAQQKQGSK TVATWQSQHM FASGLAIETS ASLDEFKYGF PSAGLSECSN RWWGSSIDSN  180
DGVSKDEDTK TSSEVKDASK VQVDDSASMC EERTDSMEED SKSDKQNEIL LSATRKRALE  240
EGKKALNFSV LKKYGADKLR NEEKILLRRL YQTS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74480.13e-09Nin-like family protein