PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01434.1.g00120.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 389aa    MW: 41937.8 Da    PI: 9.7328
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01434.1.g00120.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.12.2e-13270309347
                           AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaai 47 
                                   y+G+r ++ +g+Wv+eIr+p+    + +r++lg++ tae+Aa+a++
  Zmw_sc01434.1.g00120.1.am.mk 270 YRGIR-CR-SGKWVSEIREPR----KaRRIWLGTYPTAEMAAAAYD 309
                                   9***9.55.6*********94....36******************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.83E-11269310IPR016177DNA-binding domain
PROSITE profilePS5103214.658269309IPR001471AP2/ERF domain
SMARTSM003801.1E-10269324IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.8E-18270310IPR001471AP2/ERF domain
PfamPF008471.4E-6270309IPR001471AP2/ERF domain
CDDcd000189.15E-17270309No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MPRADRGNLW ERSRDTGLPA ESRVRPANRD SRKVADRGRH GSGSRAAPLQ GHWTLVRPLD  60
RGRFFVPKQT DSDRSLQGTG RSVVVHARVS VVVVCAADIP ERIPCPTTAR LRPSCDHDNL  120
RRSRQMASEK KKDESPGPRL EATRQPQSDA FPASLSLTAT APLPSCSPED KTKGGKGNQL  180
SASHPPAQIT RLPPQRAVSL HCQRPQQQQS PASSPPDTKP QAPGPGPSSP CSTTPPVAQG  240
DATTGVSTAP AAATSSGEPS PRSSGKHAFY RGIRCRSGKW VSEIREPRKA RRIWLGTYPT  300
AEMAAAAYDG PQQQHGMSSA AAGASSCAPQ QEFGNEEFMD EEAIFEMPQL LRNMAAGMMM  360
SPPRLSPYTS DESPDPSEAG ESLWSYRDP
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36542762