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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Zosma66g00740.1 | ||||||||
| Common Name | ZOSMA_66G00740 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family | Nin-like | ||||||||
| Protein Properties | Length: 275aa MW: 30565.9 Da PI: 10.2835 | ||||||||
| Description | Nin-like family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | RWP-RK | 64.3 | 2e-20 | 36 | 81 | 5 | 50 |
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50
i +e++ k Fs pi++AA +Lgvc++vLKr+CR++G++ WP+Rk++
Zosma66g00740.1 36 IPFEEITKLFSVPIAEAAAKLGVCTSVLKRKCRENGLPKWPYRKVH 81
679*****************************************85 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS51519 | 14.971 | 13 | 105 | IPR003035 | RWP-RK domain |
| Pfam | PF02042 | 4.2E-19 | 38 | 81 | IPR003035 | RWP-RK domain |
| Sequence ? help Back to Top |
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| Protein Sequence Length: 275 aa Download sequence Send to blast |
MSDFSQQHQL QQPPLGSLSQ TITHSIPLQQ HGSVFIPFEE ITKLFSVPIA EAAAKLGVCT 60 SVLKRKCREN GLPKWPYRKV HAGKSVEDVK KEAAVEKDLR LAKQKAVCSP MISNLSSSWT 120 IQQSKDSRKF FPQNSSYHTS DTTTIATTNN SNNNFNYRTC KTEQTFPRTI PNYLDEFKYG 180 FPSNGLSSLS NNKCWMTGNQ CNMTWKCVSC NMVTQTGSSK LTQLRKRGIG DGGESLKRIG 240 VSKGMVSKSE KSVLLQVFSK SLPSQWKHLS SSLL* |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| TrEMBL | A0A0K9NSB7 | 0.0 | A0A0K9NSB7_ZOSMR; Uncharacterized protein | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Monocots | OGMP6705 | 32 | 42 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G35590.1 | 1e-10 | RWP-RK domain-containing protein | ||||
| Link Out ? help Back to Top | |
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| Phytozome | Zosma66g00740.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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