PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma193g00210.1
Common NameZOSMA_193G00210
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family ERF
Protein Properties Length: 204aa    MW: 22174 Da    PI: 4.8958
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma193g00210.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.71.2e-124492255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       y+GVr +    +Wv+eIr p   gk kr++lg++  +e+Aa a++ a   l+g
  Zosma193g00210.1 44 VYRGVRCRG--VKWVSEIRQP---GKAKRIWLGTYHLPEMAAIAYDVASFTLRG 92
                      59***9655..69*******8...545********************9988886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.6E-2344106IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-2344102IPR001471AP2/ERF domain
PfamPF008471.6E-64492IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-1644102IPR016177DNA-binding domain
PROSITE profilePS5103217.64944100IPR001471AP2/ERF domain
CDDcd000181.20E-2445102No hitNo description
PRINTSPR003678.7E-64556IPR001471AP2/ERF domain
PRINTSPR003678.7E-682102IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MDDSVPTTLA LQKSPTSSSS AMVGVDDNHL MAAASTASPG KHQVYRGVRC RGVKWVSEIR  60
QPGKAKRIWL GTYHLPEMAA IAYDVASFTL RGVDAVLNFP DSVKSHPVPA STSPSDIQTA  120
AAAAANDFLQ KNSVVAVDKE IKELAWEDEN HEFMDEDEMY NMPKFLENMA EAMLMSPPRM  180
NPAASDESPK GSDCHAILWN HDL*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00558DAPTransfer from AT5G52020Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010278525.15e-55PREDICTED: ethylene-responsive transcription factor ERF026-like
TrEMBLA0A0K9PRC61e-149A0A0K9PRC6_ZOSMR; Dehydration responsive element binding transcription factor 1B
STRINGXP_010278525.12e-54(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36542762
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.12e-38ERF family protein