PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G080731_P02
Common NameLOC100274148, ZEAMMB73_652258
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 314aa    MW: 35226.3 Da    PI: 10.7755
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G080731_P02genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.73.3e-104989545
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                       k+ rr+++NReAAr+sR+RKka++e+Le+   +L++  ++L
  GRMZM2G080731_P02 49 KALRRLAQNREAARKSRLRKKAYVEQLENSRLKLSQLEQEL 89
                       788*************************9877777766655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-443143IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.0364791IPR004827Basic-leucine zipper domain
PfamPF001702.4E-74989IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-74994No hitNo description
SuperFamilySSF579598.13E-74992No hitNo description
PROSITE patternPS0003605267IPR004827Basic-leucine zipper domain
PfamPF141442.3E-31133205IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MAYASPGTDD TSTDLDTDEK NHMLELGQLV SLTASDSGNK AKDKLLGQKA LRRLAQNREA  60
ARKSRLRKKA YVEQLENSRL KLSQLEQELQ RARQQGIFIP TPGDDQQPNS TSEKGALAFD  120
KDYAGWEDEH RKQISELRAA LSAHAGDDEL RRIVDGVMAH HHEAFRLKCV AARADAFHVL  180
SGMWKTPVER CFMWLGGFRP SEILKYSSSQ AIWTPSPSGS SRAYTACSSP RSKPKRASRS  240
GCKRCSSRSR RPSRRQGPRA CLCLQVVLLR LATTPLQTAR GRWRRRLRSL SLLKAWCMRL  300
TVCGGRLLSR CSAC
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.74720.0silk
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G080731
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G080731_P02
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0373740.0BT037374.1 Zea mays full-length cDNA clone ZM_BFb0166L17 mRNA, complete cds.
GenBankBT0424500.0BT042450.1 Zea mays full-length cDNA clone ZM_BFb0274O23 mRNA, complete cds.
GenBankJX4699400.0JX469940.1 Zea mays subsp. mays clone UT3200 bZIP-type transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008654627.10.0putative bZIP transcription factor superfamily protein isoform X3
SwissprotQ415586e-91HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLB4FJT61e-148B4FJT6_MAIZE; Transcription factor TGA6
TrEMBLK4JRQ71e-148K4JRQ7_MAIZE; BZIP-type transcription factor (Fragment)
STRINGGRMZM2G080731_P031e-136(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.57e-74TGACG motif-binding factor 6