PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G025812_P01
Common Namepco110951, ZEAMMB73_081567
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 300aa    MW: 32184.6 Da    PI: 4.5443
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G025812_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.56e-13140197461
                        XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                        +k+ +r ++NR +A +sR+RKk +i+ Le+k+k Leae ++L   l+ +  e  +l++
  GRMZM2G025812_P01 140 SKKKMRQMRNRDSAMKSRERKKSYIKDLETKSKHLEAECRRLSYALQCYAAENMALRQ 197
                        699***************************************9999888877777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.8E-13137200No hitNo description
SMARTSM003382.2E-5137201IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.576139202IPR004827Basic-leucine zipper domain
PfamPF001709.7E-10141197IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-11141199No hitNo description
CDDcd147042.82E-15142193No hitNo description
PROSITE patternPS000360145159IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MDIDLFPDID LDALLASFSG DPAAVSGLII PSPPPPAPAT AHDAEAGSPE SVTSRTNPLG  60
EVALSEIERL LMQEGEAELG GEVDGISVDQ FFDALYDGEE AKGEREAGAS ADVDSGRDDV  120
LEVVTPEAGT VEVDGDDPIS KKKMRQMRNR DSAMKSRERK KSYIKDLETK SKHLEAECRR  180
LSYALQCYAA ENMALRQSLL KDRPLGAPTA TQESAVLTET LPLVSLLWLV SIVCLFLMPV  240
LPNRSPAAPS SGGRDLVMAA GKTSSETPEI LELILHGRRC KSTRAKIKLC ILPFHAGAAC
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.61810.0aerial organ| cell culture| ear| endosperm| meristem| ovary| tassel
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G025812
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in endoplasmic reticulum (ER) stress response (PubMed:21223397, PubMed:22050533, PubMed:22199238). Acts downstream of the ER stress sensors IRE1, BZIP39 and BZIP60 to activate BiP chaperone genes (PubMed:22050533, PubMed:22199238). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22199238}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G025812_P01
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By dithiothreitol-induced endoplasmic reticulum (ER) stress response (PubMed:22050533, PubMed:21223397). Induced by salt stress (PubMed:22050533). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0864640.0BT086464.1 Zea mays full-length cDNA clone ZM_BFc0169L15 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001147256.10.0uncharacterized protein LOC100280864
SwissprotQ69XV01e-100BZP50_ORYSJ; bZIP transcription factor 50
TrEMBLC4J6L70.0C4J6L7_MAIZE; BZIP transcription factor 60
TrEMBLK4JBU30.0K4JBU3_MAIZE; BZIP-type transcription factor (Fragment)
STRINGGRMZM2G025812_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69343750
Representative plantOGRP54681518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.13e-15basic region/leucine zipper motif 60
Publications ? help Back to Top
  1. Wakasa Y, et al.
    Expression of ER quality control-related genes in response to changes in BiP1 levels in developing rice endosperm.
    Plant J., 2011. 65(5): p. 675-89
    [PMID:21223397]
  2. Lu SJ, et al.
    Conservation of IRE1-regulated bZIP74 mRNA unconventional splicing in rice (Oryza sativa L.) involved in ER stress responses.
    Mol Plant, 2012. 5(2): p. 504-14
    [PMID:22199238]