 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
AC198366.3_FGP004 |
| Common Name | LOC107228384, ZEAMMB73_283401 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
|
| Family |
GRAS |
| Protein Properties |
Length: 506aa MW: 55337.9 Da PI: 7.3345 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| AC198366.3_FGP004 | genome | MaizeSequence | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 347.2 | 2.6e-106 | 45 | 503 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPi 90
l++lL++cA v++g + +a+ +L+++ +las d+ ++qRlaa+f+ ALa++l++ v++l++al p+ + s+ + + aa++ +++v P+
AC198366.3_FGP004 45 LISLLYQCAAEVAAGAFDRANFYLEQITQLASLDApHTLQRLAAVFADALARKLLNLVPGLSRALlPTGPGSPAEAHLVPAARRHLFDVLPF 136
5799*******************************99***************************966667777778888889999******* PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfd..isqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
+k+++lt+N+a+lea+ege+ vH++D++ + +++QW+aL++a+ sR++gpp+lR+T+v++ ke l +++ La+ Ae++++pf+f++
AC198366.3_FGP004 137 MKLAYLTTNHAVLEAMEGERFVHVVDLSgpAANPVQWIALFHAFRSRRGGPPHLRVTAVHD----AKEFLASMACVLAREAEAFDIPFQFSA 224
***************************866899****************************....99************************* PP
GRAS 181 lvakrledleleeL....rvkpgEalaVnlvlqlhrll...................................................... 214
v+ rledl+ ++L rv++gEalaV++v qlhrll
AC198366.3_FGP004 225 -VEARLEDLDADALrhllRVRSGEALAVSVVGQLHRLLaaddagggrssrhvhvpgsscltpvqiiarsspssfgellerelntrlqlspdy 315
.7999****9988766668999********************************************************************** PP
GRAS 215 .................desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpres...eerikv 285
+++ + + + ++L++v+ lsPk++vv+e ea+hn+++F+erf eal+yy++lfd+l a++++++ er+
AC198366.3_FGP004 316 spvlsispqsspvpgqqQQREKAP-KLGSFLRAVRALSPKIMVVAEPEANHNAPTFMERFEEALNYYASLFDCLeRASAAQAHrcaGERARA 406
**************8743333333.5999*********************************************5455544447779***** PP
GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdg......yrveee..sgslvlgWkdrpLv 368
Er +lg+ei+ vva egaer+erhe+l++W +r+e+aG++ v ls++ +++a+ ll+ ++ + g y+v ++ ++++++W+++pL+
AC198366.3_FGP004 407 ERLVLGEEIRGVVAREGAERKERHERLARWARRMEAAGMERVGLSYDGMMEARKLLQSCGwG-GggddsaYQVAHDasGKAFFFCWHRKPLY 497
************************************************************54.44899999999654255666********* PP
GRAS 369 svSaWr 374
svSaWr
AC198366.3_FGP004 498 SVSAWR 503
*****8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 506 aa
Download sequence Send
to blast |
MDMFQEDTLS SATSSPASSL CTPSPHPHGS SWVQELSHDQ QGLRLISLLY QCAAEVAAGA 60
FDRANFYLEQ ITQLASLDAP HTLQRLAAVF ADALARKLLN LVPGLSRALL PTGPGSPAEA 120
HLVPAARRHL FDVLPFMKLA YLTTNHAVLE AMEGERFVHV VDLSGPAANP VQWIALFHAF 180
RSRRGGPPHL RVTAVHDAKE FLASMACVLA REAEAFDIPF QFSAVEARLE DLDADALRHL 240
LRVRSGEALA VSVVGQLHRL LAADDAGGGR SSRHVHVPGS SCLTPVQIIA RSSPSSFGEL 300
LERELNTRLQ LSPDYSPVLS ISPQSSPVPG QQQQREKAPK LGSFLRAVRA LSPKIMVVAE 360
PEANHNAPTF MERFEEALNY YASLFDCLER ASAAQAHRCA GERARAERLV LGEEIRGVVA 420
REGAERKERH ERLARWARRM EAAGMERVGL SYDGMMEARK LLQSCGWGGG GDDSAYQVAH 480
DASGKAFFFC WHRKPLYSVS AWRPAA
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT068885 | 0.0 | BT068885.1 Zea mays full-length cDNA clone ZM_BFc0155C10 mRNA, complete cds. |
