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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Vradi0283s00120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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Family | BES1 | ||||||||
Protein Properties | Length: 326aa MW: 35203.3 Da PI: 8.3703 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 216.6 | 5.9e-67 | 2 | 145 | 1 | 150 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspes 92 ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gn+klpk++DnneVlkALc+eAGw+ve+DGttyrkg+kple+++++g s+ asp+s Vradi0283s00120.1 2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLERMDIVGGSSAASPCS 93 5899**************************************************************************************** PP DUF822 93 slqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150 s++ +sp++sy++sp sssfpspss+ +++ +a +sl+p+l++ls++sss+ Vradi0283s00120.1 94 SYH--------PSPCASYNPSPGSSSFPSPSSSPYTNIPNAdgNSLIPWLKNLSTASSSA 145 ***........*******************9988887776677**********9988765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.3E-65 | 3 | 139 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence Send to blast |
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNF KLPKHCDNNE VLKALCNEAG 60 WTVEPDGTTY RKGCKPLERM DIVGGSSAAS PCSSYHPSPC ASYNPSPGSS SFPSPSSSPY 120 TNIPNADGNS LIPWLKNLST ASSSASSPKL PHLYLHSGSI SAPVTPPLSS PTARTPRINA 180 EWEDQSVRPG WTRQQHYSFL PSSSPPSPGR QVVDPEWFAG IKLPHVNPTS PTFSLISSNP 240 FAFKEDGLAG SGSRMWTPAH SGTCSPAVAA GTDQNADIPM SEAVSDEFAF GSNMLGLVKP 300 WEGERIHEEF GSDDLELTLG NSKTR* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 6e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 6e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 6e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 6e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00248 | DAP | Transfer from AT1G78700 | Download |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Vradi0283s00120.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_014523071.1 | 0.0 | BES1/BZR1 homolog protein 4 isoform X1 | ||||
Refseq | XP_014523072.1 | 0.0 | BES1/BZR1 homolog protein 4 isoform X2 | ||||
Swissprot | Q9ZV88 | 1e-138 | BEH4_ARATH; BES1/BZR1 homolog protein 4 | ||||
TrEMBL | A0A1S3VXZ8 | 0.0 | A0A1S3VXZ8_VIGRR; BES1/BZR1 homolog protein 4 isoform X1 | ||||
STRING | XP_007149549.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2661 | 33 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 1e-124 | BES1/BZR1 homolog 4 |