PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0447s00110.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family NAC
Protein Properties Length: 591aa    MW: 66023 Da    PI: 5.8321
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0447s00110.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM26.91.4e-082248127
               NAM  1 lppGfrFhPtdeelvveyLkkkvegkk 27
                      lp GfrF+P+deelv++yL++k++g+ 
  Vang0447s00110.1 22 LPLGFRFRPSDEELVDYYLRQKINGNG 48
                      699********************9976 PP
2NAM82.39.8e-265011264127
               NAM  64 rdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                       +d+ky++g+r nrat++gyWkatgkd++++s +  l+g+kktLvfy+grapkg++t+Wvmheyr
  Vang0447s00110.1  50 EDRKYPNGHRLNRATSHGYWKATGKDRKIKS-GMILIGMKKTLVFYTGRAPKGKRTNWVMHEYR 112
                       689****************************.99*****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100529.6251136IPR003441NAC domain
SuperFamilySSF1019413.4E-4218136IPR003441NAC domain
PfamPF023651.5E-2123112IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 591 aa     Download sequence    Send to blast
MSSLECYSSR GDDVAIVSLD SLPLGFRFRP SDEELVDYYL RQKINGNGAE DRKYPNGHRL  60
NRATSHGYWK ATGKDRKIKS GMILIGMKKT LVFYTGRAPK GKRTNWVMHE YRPTLKELDG  120
TNPGQNAYVL CRLFKKHDES LEVSHCDEAE QIPSTPIAAN YSTEEIQSGL GVVALSPSLV  180
TEDDKHQTIV PTHSEEAISN VITPVDCHSD GYDASDAQDK YLAPAAEEFQ PWNVDMYYDP  240
KNELLDDKLF SPELALVQPE FHYQPNSESD SRYGLQYGTN ETNISDFLNS VVNWDELPYE  300
ESNCQQRTYP SFNVQNSALG SDIDSELANI IYMQAGYAEE ANDRKIPLVI APEFCSTTGI  360
PIARGGDEQK SNVELFQSIS QRDFPDVNMG QVYNVVHDYP PPRIYNTVPS GDTGIIRRTR  420
VVQTEKLSAN VTQGTAQRRI RLAQKAQNKM VKKELDSKPI IAVEEKASEN HVSDGSATLT  480
NDGNELQKTP EANGNRKISR QVAKASSTFG LKDFLLLRRV PYISKAASNR WLVCRLLMYI  540
GSAVPPPNFL ALPFEFAASP FHINKGGKNN LKVLNYLTFN DNSSVSTICK *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A1e-262114019172NAC domain-containing protein 19
3swm_B1e-262114019172NAC domain-containing protein 19
3swm_C1e-262114019172NAC domain-containing protein 19
3swm_D1e-262114019172NAC domain-containing protein 19
3swp_A1e-262114019172NAC domain-containing protein 19
3swp_B1e-262114019172NAC domain-containing protein 19
3swp_C1e-262114019172NAC domain-containing protein 19
3swp_D1e-262114019172NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0447s00110.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017422482.10.0PREDICTED: NAC domain-containing protein 91
TrEMBLA0A0L9UE110.0A0A0L9UE11_PHAAN; Uncharacterized protein
STRINGXP_007136363.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55513353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.12e-59NAC 014