PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678447024
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 177aa    MW: 19427.6 Da    PI: 9.001
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678447024genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.9e-1973123255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ taeeAa a+++a+ +++g
  678447024  73 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAAWAYDRAAYRMRG 123
                8********.***********9987..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.15E-2972132No hitNo description
Gene3DG3DSA:3.30.730.105.0E-3272132IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-2373133IPR016177DNA-binding domain
SMARTSM003802.3E-3773137IPR001471AP2/ERF domain
PROSITE profilePS5103224.18473131IPR001471AP2/ERF domain
PfamPF008473.2E-1373123IPR001471AP2/ERF domain
PRINTSPR003678.1E-117485IPR001471AP2/ERF domain
PRINTSPR003678.1E-1197113IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051301Biological Processcell division
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
RSASFNLIPC LTDGWGDLPL KVDDSEDMVI YGILRDAVNG GWSPFGDVKS EPELNAAAAA  60
TESQESPPSK GKHYRGVRQR PWGKFAAEIR DPAKNGARVW LGTYETAEEA AWAYDRAAYR  120
MRGSKALLNF PHRVGSDDPD PVRITAKRRS PEAAATTLSA SPRRKKSRSP SEPEVES
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-3869138170ATERF1
3gcc_A5e-3869138170ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146165KRRSPEAAATTLSASPRRKK
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678447024
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethephon (ethylene-releasing compound) in buds and to a lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by both protein kinases and protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076437.21e-82LOW QUALITY PROTEIN: ethylene-responsive transcription factor 2-like
RefseqXP_012858578.12e-82PREDICTED: ethylene-responsive transcription factor 2-like
SwissprotQ404793e-79ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLA0A2G9FVK02e-82A0A2G9FVK0_9LAMI; Uncharacterized protein
STRINGMigut.F00528.1.p8e-82(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40542245
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-51ethylene responsive element binding factor 1
Publications ? help Back to Top
  1. Nakano T,Nishiuchi T,Suzuki K,Fujimura T,Shinshi H
    Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells.
    Plant Cell Physiol., 2006. 47(4): p. 554-8
    [PMID:16452120]