PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678440099
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 299aa    MW: 34030.3 Da    PI: 8.5779
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678440099genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP120.22.5e-37762083135
        TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......ssssaseceaesssssasnsssg...kaak 92 
                g+kdrhski+T++g RdRRvRls+++a++fFdLqd LG+dk skti WLl q +++ik+l ++       +         +++s+s++ + s+   ++++
  678440099  76 GQKDRHSKIYTAKGYRDRRVRLSLQVARKFFDLQDLLGYDKSSKTIGWLLDQCNKEIKDLKDLqpgnwvkE--------GKTESESED-KVSAvvqHKSR 166
                79*************************************************************44333221........112222222.11113334455 PP

        TCP  93 saa.kskksqksaasalnlakesrakarararertrekmriknk 135
                ++   skk++k+a      +kesr+kararar rtre+  ik++
  678440099 167 NKRvVSKKPRKRAC--ERDMKESREKARARARCRTREQRLIKKQ 208
                55524444444444..777899****************999976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.0E-3376202IPR005333Transcription factor, TCP
PROSITE profilePS5136929.53377135IPR017887Transcription factor TCP subgroup
PROSITE profilePS5137010.57185202IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MFDWFSIDNL LLECGFTSLS ENAGNAAAMA LGSAEFAGPF LEEHEFPLNQ MLNREEAGIK  60
EDSTSKLGIL QKQGSGQKDR HSKIYTAKGY RDRRVRLSLQ VARKFFDLQD LLGYDKSSKT  120
IGWLLDQCNK EIKDLKDLQP GNWVKEGKTE SESEDKVSAV VQHKSRNKRV VSKKPRKRAC  180
ERDMKESREK ARARARCRTR EQRLIKKQMS QWSPNFFEEP DQGSHISVHS HNRDVGTIEK  240
LLGTETAATT STSCPSFSTF CYLPATADSH FQELTGNWEI QENNKQFASV DQPVYSLLP
Cis-element ? help Back to Top
SourceLink
PlantRegMap678440099
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7A9P11e-45A0A2Z7A9P1_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24362359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.11e-21TCP domain protein 12