PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678375688
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB
Protein Properties Length: 712aa    MW: 81272 Da    PI: 8.2789
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678375688genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.82.1e-07453493340
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 
                      +W +eE ell ++ +++++g   +W+ I++++g +R+ +++
        678375688 453 PWNKEEIELLRKGLQKYPKGtsrRWEVISEYIGSNRSVEEI 493
                      8********************************99998875 PP
2Myb_DNA-binding23.51.3e-07656699445
                      S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 
                      W++  ++ l++a k ++++   +W+++a+ ++ g+t  qck ++ 
        678375688 656 WSEVHEKALIQALKTFPKDtnqRWERVAAAVP-GKTVVQCKKKFA 699
                      99999***************************.********9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.287.1101.4E-1985187IPR001623DnaJ domain
SuperFamilySSF465653.53E-1988196IPR001623DnaJ domain
SMARTSM002711.0E-1290165IPR001623DnaJ domain
PROSITE profilePS5007617.57391173IPR001623DnaJ domain
CDDcd062579.80E-1291162IPR001623DnaJ domain
PfamPF002262.0E-1691170IPR001623DnaJ domain
PRINTSPR006252.1E-696114IPR001623DnaJ domain
PRINTSPR006252.1E-6114129IPR001623DnaJ domain
PRINTSPR006252.1E-6145165IPR001623DnaJ domain
PROSITE patternPS006360150169IPR018253DnaJ domain, conserved site
SuperFamilySSF466891.64E-7447495IPR009057Homeodomain-like
PROSITE profilePS512937.267449507IPR017884SANT domain
SMARTSM007171.1E-6450503IPR001005SANT/Myb domain
CDDcd001671.35E-5453493No hitNo description
Gene3DG3DSA:1.10.10.602.4E-4453493IPR009057Homeodomain-like
PfamPF002491.1E-6453493IPR001005SANT/Myb domain
PROSITE profilePS512939.099651706IPR017884SANT domain
SMARTSM007172.4E-8652704IPR001005SANT/Myb domain
SuperFamilySSF466894.34E-9653701IPR009057Homeodomain-like
CDDcd001672.70E-6656702No hitNo description
Gene3DG3DSA:1.10.10.602.0E-5656701IPR009057Homeodomain-like
PfamPF002499.2E-7656700IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 712 aa     Download sequence    Send to blast
MLLISYLEEI VDGEPIFFSS NALPVKATKF EPAGHAFHSA ALRLSGYFVD VKSVDEGKDV  60
STEKENFYFQ SSNSYSSKAN KKSTGETKQQ DHYTLLGLGH LRYLATEDQI KKSYRETALR  120
LHPDKQGALV LAEETEAAKQ EKKDKIDSDF KAIKEAYEVL MDPVRRRMYD STDEFDDEIP  180
HDCDPVDFFK IFGPAFLRNG RWSVNQPVPM LGDDNTPIEV VDSFYDFWYN FKSWREFPHA  240
DEFDLEQAES RDHKRWMERQ NAKLSEKSRK EEYARLRTLV DNAYKRDPRI LRRKEEQKAD  300
KQRKKEAKLQ AKRLLEEEAA RIANEEKLRR EEEEKRAAEA ASNQKKLKEK EKKLLRKERS  360
RLRALASPIF SQKLLGIVDD DVENLCSSLD KDQLMSLCDR MEGKEASEMA KVLMEKLVHD  420
KQPSREDLNS QQNGSTPMKK EAAFSGPQKS ETPWNKEEIE LLRKGLQKYP KGTSRRWEVI  480
SEYIGSNRSV EEILKATKSV LLQKPDSTKV FDSFLEKRKP AQKIDSPLST RGEILGASVG  540
SHTVNEHHHP NSESPALQQE SARTNQMPSN SNQATWTAAQ ETARSQEQIP AAVPGKTVDQ  600
YRANLESMKN PRNDGNATTS NPELSDSSSH THKSNGSAHS ETENGSAARL TDGDFWSEVH  660
EKALIQALKT FPKDTNQRWE RVAAAVPGKT VVQCKKKFAS MKENFRSKRG AA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5dje_A1e-1718729020123Zuotin
5dje_B1e-1718729020123Zuotin
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678375688
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072931.10.0dnaJ homolog subfamily C member 2-like
TrEMBLA0A4D9C3E50.0A0A4D9C3E5_SALSN; DnaJ-like protein subfamily C member 2
STRINGMigut.I00387.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA95572225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11450.10.0DnaJ domain ;Myb-like DNA-binding domain