PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678363322
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB
Protein Properties Length: 715aa    MW: 81576.4 Da    PI: 7.9226
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678363322genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.31.5e-07454494340
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 
                      +W++eE ell ++ +++++g   +W+ I++++g +R+ +++
        678363322 454 PWSKEEIELLRKGMQKYPKGtsrRWEVISEYIGSNRSVEEI 494
                      7********************************99998875 PP
2Myb_DNA-binding24.84.9e-08569614346
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 
                       WTt  +  l +a +   ++   +W++Ia+ ++ g+t  qck++++ 
        678363322 569 TWTTAQENALMQALRSSSKEatrSWERIAAAVP-GKTVDQCKNKFRL 614
                      7*****************99*************.**********986 PP
3Myb_DNA-binding28.14.7e-09658702345
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 
                      +W++  ++ l++a k ++++   +W+++a+ ++ g+t  qck ++ 
        678363322 658 AWSEVQEKALIQALKTFPKDtnqRWERVAAAVP-GKTVVQCKKKFA 702
                      8********************************.********9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.287.1102.3E-1987182IPR001623DnaJ domain
SuperFamilySSF465651.05E-1889197IPR001623DnaJ domain
SMARTSM002716.1E-1391166IPR001623DnaJ domain
PfamPF002265.0E-1692171IPR001623DnaJ domain
CDDcd062577.83E-1292163IPR001623DnaJ domain
PROSITE profilePS5007617.55892174IPR001623DnaJ domain
PRINTSPR006252.7E-697115IPR001623DnaJ domain
PRINTSPR006252.7E-6115130IPR001623DnaJ domain
PRINTSPR006252.7E-6146166IPR001623DnaJ domain
PROSITE patternPS006360151170IPR018253DnaJ domain, conserved site
PROSITE profilePS500906.829447502IPR017877Myb-like domain
SuperFamilySSF466891.42E-7448496IPR009057Homeodomain-like
SMARTSM007174.4E-6451504IPR001005SANT/Myb domain
CDDcd001672.08E-5454494No hitNo description
Gene3DG3DSA:1.10.10.607.1E-5454494IPR009057Homeodomain-like
PfamPF002496.2E-7454494IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.7E-6559614IPR009057Homeodomain-like
SuperFamilySSF466892.84E-8559614IPR009057Homeodomain-like
PROSITE profilePS512937.994565620IPR017884SANT domain
SMARTSM007175.4E-6566618IPR001005SANT/Myb domain
CDDcd001677.40E-5569616No hitNo description
PfamPF002491.6E-6569614IPR001005SANT/Myb domain
PROSITE profilePS5129310.751654709IPR017884SANT domain
SMARTSM007172.7E-10655707IPR001005SANT/Myb domain
SuperFamilySSF466895.16E-10657712IPR009057Homeodomain-like
CDDcd001676.30E-7658705No hitNo description
Gene3DG3DSA:1.10.10.606.4E-6658704IPR009057Homeodomain-like
PfamPF002493.5E-8658703IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 715 aa     Download sequence    Send to blast
MLFITYLEEI VDGEPIFFSS NAFPVKATKF EPAGHAFHSA ALRLSGYSVD VLKSEDDGKD  60
VSSEKESYYF QSYNSYSSKG NKKSAGETKQ QDHYALLGLG HLRYLATEDQ IKKSYRETAL  120
RLHPDKQGAL VLAEETEAAK QEKKDKIDSD FKAIKEAYEV LMDPLRRRIY DSTDEFDDEI  180
PYDCEPVDFF KIYGSAFLRN GRWSVNQPVP MLGDDNMPIE EVDSFYDFWY NFKSWREFPH  240
ADEFDLEQAE SRDHKRWMER QNAKLSEKAR KEDYARLRTL VDNAYKRDPR ILRRKEEQKA  300
DKQRKKEAKL QAKRLLEEEA ARIANEERLR KEEEERRAAE TALNQKKLKE KEKKLLRKER  360
SRLRALANPI LSQNLLGIVD DDVEHACSSL DKDQLMSLCD EMEGKEALER AKFLKEKLLQ  420
DKKPNIEDSN SLQNGSISMK GGAVLSGPQK SEAPWSKEEI ELLRKGMQKY PKGTSRRWEV  480
ISEYIGSNRS VEEILKATKS VLLQKPDSTK AFDSFLEKRK PAHTIASPLS TRGEIFTESG  540
NNVAEESVGS HSHANAGTNQ MPSNSNQDTW TTAQENALMQ ALRSSSKEAT RSWERIAAAV  600
PGKTVDQCKN KFRLMKSLRN DGQATESDAE PSSYSQKSNG SAHTEADNGA TRLTDGDAWS  660
EVQEKALIQA LKTFPKDTNQ RWERVAAAVP GKTVVQCKKK FASMKENFRN KKSAV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5dje_A5e-1818829120123Zuotin
5dje_B5e-1818829120123Zuotin
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678363322
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072931.10.0dnaJ homolog subfamily C member 2-like
TrEMBLA0A4D9C3E50.0A0A4D9C3E5_SALSN; DnaJ-like protein subfamily C member 2
STRINGMigut.I00387.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA95572225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11450.10.0DnaJ domain ;Myb-like DNA-binding domain