PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678319821
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 318aa    MW: 35436.9 Da    PI: 9.8226
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678319821genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP122.93.7e-38851982118
        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg.......kaaksa 94 
                +gkkdrhski+T++g RdRR+Rls+++a++fFdLqd+LG+dk+s+tieWL++++ +aikelt + sss++    +s + s+s+ s         +     
  678319821  85 PGKKDRHSKICTAQGIRDRRMRLSLQVARKFFDLQDMLGYDKASNTIEWLFTKSGKAIKELTFNISSSNQ----QSLNISNSFASDCevvsvmeE----- 175
                79**************************************************************333331....122222221111122211110..... PP

        TCP  95 akskksqksaasalnlakesraka 118
                  +  +++s+ +  n+ k  rak+
  678319821 176 -AQTLPPRSDLKEGNKEKARRAKE 198
                .11111111111122222222222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036344.7E-4086200IPR005333Transcription factor, TCP
PROSITE profilePS5136935.54287145IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MFHPSSMRAS SSFSWGENPS SQQGGPHLLD GSDMPMNHHP VPEQNQWIFG NLFDQRDGNP  60
KKVDPSSAGG AVRRRSLGAV PRRRPGKKDR HSKICTAQGI RDRRMRLSLQ VARKFFDLQD  120
MLGYDKASNT IEWLFTKSGK AIKELTFNIS SSNQQSLNIS NSFASDCEVV SVMEEAQTLP  180
PRSDLKEGNK EKARRAKEKK RVIKDLGFSN INQDPVFLNN ARNLPYGVDC TSLEQQPADC  240
GTIEKLLGIP DSSMDHPFSW VTYMDPNISF MGLLGWDIFT THERGGSTSS APASPPTNST  300
LVYPFRETKP RGAGRLHP
Cis-element ? help Back to Top
SourceLink
PlantRegMap678319821
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071262.25e-53transcription factor TCP12
TrEMBLA0A2G9I1P23e-52A0A2G9I1P2_9LAMI; Uncharacterized protein
TrEMBLS8DNE32e-53S8DNE3_9LAMI; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24362359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.15e-29TCP domain protein 12