![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_011078431.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
|
||||||||
Family | HRT-like | ||||||||
Protein Properties | Length: 421aa MW: 47747.6 Da PI: 10.0009 | ||||||||
Description | HRT-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HRT-like | 57.6 | 2.1e-18 | 314 | 344 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv++++GsvC++ Pv+gRKRC+eHKGm++ XP_011078431.1 314 ICGVTMGHGSVCTKAPVEGRKRCAEHKGMKV 344 8****************************97 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00719 | 9.83E-4 | 140 | 187 | No hit | No description |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 421 aa Download sequence Send to blast |
MECGKLLGGV FLRFHARRHT SLFTCKRWLY CAPKLITAGW GLVGAPPTAT SSVAAGTSGR 60 LKREDFRRTG YDSVFSEWKT LVGASDWKDH WMGKEGAERY RTQNVPRCFS CPGVYELGIA 120 MSFVGSKREP RKHDSSSVVP VYVGQADNVR TRLQRYGRDG AHLEYGSSHE EFDNCPRLFS 180 EIFSKDLSIV YRWAPMKSKK DAKNTEDQLL GLYDYAWNKR SNGGRRPDDI VKKLNCCAKK 240 SQFSFSLLKM ILQCFHQKQV DDKINNCDQF LLENNKFNSA IAAENEGIMS IIFRIMRLQP 300 GRPQSGFRVD SKGICGVTMG HGSVCTKAPV EGRKRCAEHK GMKVNGFISK YNRMGQVPPM 360 AANIGSATVA DQHCNDPKDQ RLNRSREAHK PYACEHPNNE KFAPTAYLRR WFSLRKCQEK 420 P |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | XP_011078431.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A4D9AKL6 | 1e-101 | A0A4D9AKL6_SALSN; Uncharacterized protein | ||||
STRING | Migut.J00591.1.p | 5e-95 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7741 | 23 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G56780.1 | 2e-66 | effector of transcription2 |