PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011078431.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family HRT-like
Protein Properties Length: 421aa    MW: 47747.6 Da    PI: 10.0009
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011078431.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like57.62.1e-18314344131
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                     iCGv++++GsvC++ Pv+gRKRC+eHKGm++
  XP_011078431.1 314 ICGVTMGHGSVCTKAPVEGRKRCAEHKGMKV 344
                     8****************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd007199.83E-4140187No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MECGKLLGGV FLRFHARRHT SLFTCKRWLY CAPKLITAGW GLVGAPPTAT SSVAAGTSGR  60
LKREDFRRTG YDSVFSEWKT LVGASDWKDH WMGKEGAERY RTQNVPRCFS CPGVYELGIA  120
MSFVGSKREP RKHDSSSVVP VYVGQADNVR TRLQRYGRDG AHLEYGSSHE EFDNCPRLFS  180
EIFSKDLSIV YRWAPMKSKK DAKNTEDQLL GLYDYAWNKR SNGGRRPDDI VKKLNCCAKK  240
SQFSFSLLKM ILQCFHQKQV DDKINNCDQF LLENNKFNSA IAAENEGIMS IIFRIMRLQP  300
GRPQSGFRVD SKGICGVTMG HGSVCTKAPV EGRKRCAEHK GMKVNGFISK YNRMGQVPPM  360
AANIGSATVA DQHCNDPKDQ RLNRSREAHK PYACEHPNNE KFAPTAYLRR WFSLRKCQEK  420
P
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011078431.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A4D9AKL61e-101A0A4D9AKL6_SALSN; Uncharacterized protein
STRINGMigut.J00591.1.p5e-95(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA77412330
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.12e-66effector of transcription2