PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011074989.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family DBB
Protein Properties Length: 334aa    MW: 36342.5 Da    PI: 7.1933
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011074989.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.32.7e-07443538
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
                     C+ +e+ e++lfC  ++  lC  C    H+       H+
  XP_011074989.1  4 QCDVCEKDEASLFCVADEAALCTACDHRVHHAnklagkHQ 43
                    7******99******************9964446777776 PP

2zf-B_box26.81.1e-085492238
        zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38
                    +++ C+ ++e ++ lfC++++  lC++C + +Hk   Ht
  XP_011074989.1 54 QAPLCDICQERRAFLFCQQDRAILCRECDVPIHKAnqHT 92
                    7899*****************************877776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011910.993147IPR000315B-box-type zinc finger
CDDcd000216.21E-7347No hitNo description
PfamPF006432.6E-5444IPR000315B-box-type zinc finger
SMARTSM003361.7E-7447IPR000315B-box-type zinc finger
PROSITE profilePS5011910.01153100IPR000315B-box-type zinc finger
SMARTSM003363.0E-1553100IPR000315B-box-type zinc finger
PfamPF006434.1E-75492IPR000315B-box-type zinc finger
CDDcd000211.40E-1056100No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MKIQCDVCEK DEASLFCVAD EAALCTACDH RVHHANKLAG KHQRFSLHYP SSKQAPLCDI  60
CQERRAFLFC QQDRAILCRE CDVPIHKANQ HTQKHARFLL TGVKLSAIAA LYSASQSSAE  120
SGSSTLTNNN VCDAASNFKS QESKNKPAPP IGPPMCAPST AKGTTGQSTQ AAGGQESSCA  180
RSGNVEMMNE GNLNGSISAS SISEYLIEML PGWHVEDFLD SSSNPSPSPY GFCKSGESDL  240
LQIWDADLAS SNMSGFPTEK VGSWVPQMHQ TQINQSYQST EMMGFGTTNG FRQQSKEFTA  300
NNVKPSRIRN EDNSFAVPQI RPSSAASKRS RTLW
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011074989.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074989.10.0B-box zinc finger protein 20
TrEMBLA0A2G9HVZ61e-134A0A2G9HVZ6_9LAMI; Uncharacterized protein
STRINGMigut.N03131.1.p1e-110(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14632364
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39070.15e-54DBB family protein