PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G545400.1.p
Common NamePRUPE_ppa018178mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 200aa    MW: 22101 Da    PI: 5.6199
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G545400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.5e-191665255
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        +y+GVr +k +g+Wv+eIr+p   gk++r++lg++  +e+Aa+a++aa++ l+g
  Prupe.1G545400.1.p 16 RYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSYEEPEMAAAAYDAAALHLRG 65
                        6*****999.**********8...557*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.82E-221675No hitNo description
SMARTSM003802.4E-351679IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-221674IPR016177DNA-binding domain
PfamPF008472.2E-121665IPR001471AP2/ERF domain
PROSITE profilePS5103223.3271673IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.7E-311674IPR001471AP2/ERF domain
PRINTSPR003671.0E-121728IPR001471AP2/ERF domain
PRINTSPR003671.0E-125575IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MEPPAADCHH VPSSERYRGV RKRKWGKWVS EIREPGKKTR IWLGSYEEPE MAAAAYDAAA  60
LHLRGRGAVL NFPELIDSLP RPASSSPMDV QLAAQEAALR VRRLRIGAVS TEAAGGSSSP  120
RGLSSMPVTV GLSPSQIQAI NESPLDSPKL WMQYMYRAHC HEGLSLLGDD MSCVEYYDEE  180
VELGECENMQ HLSIWDSYL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-171778668ATERF1
3gcc_A8e-171778668ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G545400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007227241.11e-145ethylene-responsive transcription factor ERF022
SwissprotQ9LQ282e-48ERF22_ARATH; Ethylene-responsive transcription factor ERF022
TrEMBLM5Y8U41e-144M5Y8U4_PRUPE; Uncharacterized protein
STRINGEMJ284401e-144(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.16e-50ERF family protein