PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016647903.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Nin-like
Protein Properties Length: 375aa    MW: 42308.2 Da    PI: 4.4494
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016647903.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK78.28.9e-25287337252
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     +++++l+dl+ y +lpi++AA+ L+vc+Tv+KriCR++G++RWP+Rki+s+
  XP_016647903.1 287 TANMTLDDLRDYVHLPIEKAARRLNVCPTVVKRICRRNGLRRWPSRKITSI 337
                     789*********************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.245277357IPR003035RWP-RK domain
Gene3DG3DSA:1.10.10.104.8E-4279331IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF020423.7E-22289337IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MADPRAVVPY HDPYDSGPYT EIMNLLNDSE HPRIDENNIP TLEGSLASPN PTPMFDEEIQ  60
DVDEPLMDQA MWDFIYGSDN GGEGINSQAG PSQIFTESSG TNPPRGDGNE QNHGFGNVRP  120
LSVWPLPSDP INCTFCQVFR EIVHFNSDNV MKLEIHGRLG VICHAILQSR PNANVNSSGN  180
HQYQILDFCK TPGEEVKQFL MQYCLERKLE GYIMQQDPLT FFYEALCVGV DWDAILNPTD  240
DFDFPPSPPD SGTAGDLEKP AAVQTEAAEH EIETNPRISL AEQRERTANM TLDDLRDYVH  300
LPIEKAARRL NVCPTVVKRI CRRNGLRRWP SRKITSINRQ ISRLRPSLDS DDPETRVHAE  360
AEISRLEREI AELVP
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_016647903.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016647903.10.0PREDICTED: uncharacterized protein LOC107880544
TrEMBLA0A314UK520.0A0A314UK52_PRUYE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF74782846
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.21e-14Nin-like family protein