PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf11133g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family FAR1
Protein Properties Length: 336aa    MW: 37884.1 Da    PI: 6.2442
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf11133g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.91.6e-0886162178
                      FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwev 78 
                               +fY+++Ak+ GFs++k++ kk+ ++ + it r++ C k gk+++ +++  k++ +    +  C+ +l+ +++ d+ + +
  Peinf101Scf11133g00001.1  86 DFYQDHAKKHGFSITKRSCKKQsSEYDLITGRRLSCHKAGKPARYQTS--KKEFEGRWAQFICDPRLRENQWLDDIYSI 162
                               6**************99998875777889*************998877..66667777777777777766666666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.7E-686162IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MQSFMDVEES SSNSQAGPGN TASVLSQVLG VHQDDSLFNN RSNSSMAGEN NDPNVATGEG  60
PGINPRAPAG GPTVGMKFPS LEAMVDFYQD HAKKHGFSIT KRSCKKQSSE YDLITGRRLS  120
CHKAGKPARY QTSKKEFEGR WAQFICDPRL RENQWLDDIY SIRSQWVPVY LTDTFWAGMR  180
STQRSESMHA FFDQFITSRT NLLTFVMQYE VALKTKLDKE SKEEESSKNT RLFSVTGSQW  240
EEQLRAGLTR NIYDMHRKQI QDSIGCNFVG FNVQDEIETF SVSDTGMGLN YAGTEYIMTV  300
TGWPVFGLHL QAVQHSWDYM QAHNSRGEIS PNAGIE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7498216
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-20FAR1-related sequence 5