PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf03747g00012.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Trihelix
Protein Properties Length: 378aa    MW: 41903 Da    PI: 9.3134
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf03747g00012.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix47.74.1e-1591181186
                  trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 
                               +W++  +++Liea  +   +l+rg+l++++W+ev++++     + ++  r+ +qCk++++ l+k+yk +k++ ++ + +  st+p
  Peinf101Scf03747g00012.1  91 CWSEAATHTLIEAWGSHYLELKRGNLRQKHWQEVADAVnalhgHTKKQYRTDIQCKNRIDTLKKKYKIEKARVSQSNGRYISTWP 175
                               7*************************************999987778889*************************99999***** PP

                  trihelix  81 yfdqle 86 
                               +f++l+
  Peinf101Scf03747g00012.1 176 HFNSLD 181
                               ****98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.0E-2689183No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
MYRRPNRTEY FSPSLLSSSN PNFSNPIPPP PSSPMSDDDH VATPSSKNNS PSPSPSPPPP  60
CTNNLQLTLP PPPQQPAPTR RQAVFPARED CWSEAATHTL IEAWGSHYLE LKRGNLRQKH  120
WQEVADAVNA LHGHTKKQYR TDIQCKNRID TLKKKYKIEK ARVSQSNGRY ISTWPHFNSL  180
DDLIGPNFKL SPSPVTVTAT PRQNTPPMLP PPPSAVPVGP RSKRPAAAAI DHTVSRRNFS  240
AMAAAAAASA SEESDEDEES ETSSPGTMSA GYSRLADAIG RFAEIYERVE HAKQKQMVEL  300
EIQRMQFAKD LELQRMRLIM ESQVNFEKLK RAKTSSQAGV STRTVCNLKK SFGGDTHISN  360
SLADSIKICY SEDERGSC
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00413DAPTransfer from AT3G58630Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009760894.11e-136PREDICTED: uncharacterized protein LOC104213156
RefseqXP_016507452.11e-136PREDICTED: trihelix transcription factor ASIL2-like
TrEMBLA0A1S4D2041e-135A0A1S4D204_TOBAC; trihelix transcription factor ASIL2-like
TrEMBLA0A1U7VEZ51e-135A0A1U7VEZ5_NICSY; uncharacterized protein LOC104213156
STRINGXP_009760894.11e-136(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13182370
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.12e-46sequence-specific DNA binding transcription factors