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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peinf101Scf01619g01001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
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Family | WRKY | ||||||||
Protein Properties | Length: 219aa MW: 24944.3 Da PI: 7.34 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 92 | 4.5e-29 | 133 | 191 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+vk++++pr+YY+C+s gC+vkk+ver+ +d +++++tYeg+Hnhe Peinf101Scf01619g01001.1 133 LDDGYKWRKYGKKKVKSNTNPRHYYKCSSGGCKVKKRVERDGNDSSYLITTYEGKHNHE 191 59********************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.9E-31 | 119 | 193 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.22E-26 | 126 | 193 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.469 | 128 | 193 | IPR003657 | WRKY domain |
SMART | SM00774 | 8.2E-31 | 133 | 192 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.2E-23 | 134 | 191 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence Send to blast |
MFSSSTFQET SNIIPHQTIY PNFASAPLIN SHMNNQDCGH NNYQDFDTSF LDQLICGDSN 60 SNSNNSLDAS IYSQNHFMQE ISTTYSGSSS ANSFDATPTN IHMNESSNME IKKEKKAEKH 120 AIAFRTKTEL EILDDGYKWR KYGKKKVKSN TNPRHYYKCS SGGCKVKKRV ERDGNDSSYL 180 ITTYEGKHNH ESPFVIYCHE TPSVSFHSEW STQAASSWR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 4e-25 | 123 | 193 | 7 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 4e-25 | 123 | 193 | 7 | 77 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009804802.1 | 1e-108 | PREDICTED: probable WRKY transcription factor 51 isoform X2 | ||||
Refseq | XP_016487859.1 | 1e-108 | PREDICTED: probable WRKY transcription factor 51 isoform X2 | ||||
Refseq | XP_019233271.1 | 1e-108 | PREDICTED: probable WRKY transcription factor 51 isoform X2 | ||||
TrEMBL | A0A1J6L0Y9 | 1e-106 | A0A1J6L0Y9_NICAT; Putative wrky transcription factor 51 | ||||
TrEMBL | A0A1S4BG69 | 1e-106 | A0A1S4BG69_TOBAC; probable WRKY transcription factor 51 isoform X2 | ||||
TrEMBL | A0A1U7YL53 | 1e-106 | A0A1U7YL53_NICSY; probable WRKY transcription factor 51 isoform X2 | ||||
STRING | XP_009804801.1 | 1e-103 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13494 | 12 | 17 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64810.1 | 7e-24 | WRKY DNA-binding protein 51 |