PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00692g18023.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

FAR1

Protein Properties

Length: 118aa MW: 13466.4 Da PI: 10.8666

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00692g18023.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	36.5	1.6e-11	11	61	1	51
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkkteke 51 +fY +YA++ GF vr+ + +ksk++++++ + fvCsk+ ++++k k+e++ Peinf101Scf00692g18023.1 11 NFYLDYAHRNGFIVRRGRVTKSKKDNSVIGQAFVCSKKDIAQRKKLKKEEK 61 6*************************************9999988874443 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	4.4E-9	11	60	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 118 aa Download sequence Send to blast
MEFLSLDDSF NFYLDYAHRN GFIVRRGRVT KSKKDNSVIG QAFVCSKKDI AQRKKLKKEE 60 KRWIISRLVS DHNHKLATPS SQNVLRSKRK NSEAQTNLIA LLDDSGVSPG KTAKSSRE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025884722.1	2e-41	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2G2ZPQ9	4e-40	A0A2G2ZPQ9_CAPAN; Uncharacterized protein
TrEMBL	D5MNY6	7e-38	D5MNY6_SOLLC; Transposon-like element Lyt2-2 DNA

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA645	8	60

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-12	FAR1-related sequence 5