PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00301g02015.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family FAR1
Protein Properties Length: 1131aa    MW: 130723 Da    PI: 8.9023
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00301g02015.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.57.6e-07434511289
                      FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 
                                Yn+ A    F vrk + ++++ n+e t+  + Cs+egk+ e+++  ++++r+r e r+gC a+        g+  + ++  eHn
  Peinf101Scf00301g02015.1 434 AYNSNAVAKSFGVRKGAITYNR-NNELTRCLLFCSCEGKSPENSNY-QERKRQRLEYRCGCMAR--------GVGSIFEICDEHN 508
                               59999*************9995.5559999************9999.99999*********985........4555667777777 PP

                      FAR1  87 Hel 89 
                               H++
  Peinf101Scf00301g02015.1 509 HPM 511
                               776 PP
2FAR121.57.6e-079451022289
                      FAR1    2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84  
                                 Yn+ A    F vrk + ++++ n+e t+  + Cs+egk+ e+++  ++++r+r e r+gC a+        g+  + ++  e
  Peinf101Scf00301g02015.1  945 AYNSNAVAKSFGVRKGAITYNR-NNELTRCLLFCSCEGKSPENSNY-QERKRQRLEYRCGCMAR--------GVGSIFEICDE 1017
                                59999*************9995.5559999************9999.99999*********985........45556677777 PP

                      FAR1   85 HnHel 89  
                                HnH++
  Peinf101Scf00301g02015.1 1018 HNHPM 1022
                                77776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF025444.8E-5104156IPR0011043-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
PfamPF025447.8E-7607662IPR0011043-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
PfamPF025441.1E-5745799IPR0011043-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
PfamPF025444.8E-5864916IPR0011043-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
PfamPF025447.5E-3610431131IPR0011043-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
PROSITE profilePS5024426.53810521105IPR0011043-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006629Biological Processlipid metabolic process
GO:0005737Cellular Componentcytoplasm
GO:0016021Cellular Componentintegral component of membrane
GO:0016627Molecular Functionoxidoreductase activity, acting on the CH-CH group of donors
Sequence ? help Back to Top
Protein Sequence    Length: 1131 aa     Download sequence    Send to blast
MFHYVVYFLL IMSLPTYIRS QFETSAYGKH YRSGSGSTIS PPLAWFLMES PTLWLTILLF  60
PFGKNYSNPL SYILISPYIF HYINRTLIYP LKLYFSSMKT TNGFPLDLAL KAIIFNILNA  120
YIQSRWVSHY ANYDDDKWFW LRFGGGVVVF ATDCPTVVHT VSHINNDFAF KIDMKFNSED  180
ESYKAYNSNA VAKSFGVRKG TITYNRNNEL TRCLLFCFCE GKSPENSNYQ ERKRQRLEYR  240
CGCMARGVGS IFEICDEHNH PMIEKNLRHF ILSGQKLTDS TKDILSSMVD AGSGSTISPP  300
LAWFLMESPT LWLTILLFPF GKNYSNPLSY ILISPYIFHY FNRTLIYPLK LYFSSMKTTN  360
GFPLDLALKA IIFNILNAYI QSRWVSHYAN YDDDKSYVND QDCPTVVHTV SHINNDFAFK  420
IDMKFNSEDE SYKAYNSNAV AKSFGVRKGA ITYNRNNELT RCLLFCSCEG KSPENSNYQE  480
RKRQRLEYRC GCMARGVGSI FEICDEHNHP MIEKNLRHFI LSGQKLTDST KDILSSMVDA  540
DGIKNAGFIE QDAHNFIQAR KRNMINSRDA QTLVNHFMNM QSEDSFNRTL IYPLKLYFSS  600
MKTTNGFPLD LALKAIIFNI LNAYIQSRWV SHYANYDDDK WFWLRFGGGV VVFATGMMVK  660
SQFETSAYGK HYRSGSGSTI SPPLAWFLME SPTLWLTILL FPFGKNYSNP LSYILISPYI  720
FHYFNRTLIY PLKLYFSSMK TTNGFPLDLA LKAIIFNILN AYIQSRWVSH YANYDDDKWF  780
WLRFGGGVVV FATGSGSTIS PPLAWFLMES PTLWLTILLF PFGKNYSNPL SYILISPYIF  840
HYFNRTLIYP LKLYFSSMKT TNGFPLDLAL KAIIFNILNA YIQSRWVSHY ANYDDDKWFW  900
LRFGGGVVVF ATDCPTVVHT VSHINNDFAF KIDMKFNSED ESYKAYNSNA VAKSFGVRKG  960
AITYNRNNEL TRCLLFCSCE GKSPENSNYQ ERKRQRLEYR CGCMARGVGS IFEICDEHNH  1020
PMIEKNLRHF ILSGQKLTDS TKDILSSMKQ GGGYKIPRGG LFEYVSCPNY LGEIIEWFGW  1080
ALMTWSFAGL AFFVFTCANL VPRAVSNHNW YLEKFGEDYP KRRNAVIPFL Y
Functional Description ? help Back to Top
Source Description
UniProtInvolved in a reduction step in the biosynthesis of the plant steroid, brassinolide. Can use progesterone, testosterone, androstenedione and campestenone as substrate. {ECO:0000269|PubMed:15993049}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC6332940.0KC633294.1 Petunia x hybrida DET2 mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotQ5K2N11e-60DET2_SOLLC; Steroid 5-alpha-reductase DET2
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1726931
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.16e-08FAR1-related sequence 10
Publications ? help Back to Top
  1. Rosati F, et al.
    5alpha-Reductase activity in Lycopersicon esculentum: cloning and functional characterization of LeDET2 and evidence of the presence of two isoenzymes.
    J. Steroid Biochem. Mol. Biol., 2005. 96(3-4): p. 287-99
    [PMID:15993049]