PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00251g06012.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family Trihelix
Protein Properties Length: 545aa    MW: 62095.1 Da    PI: 7.1904
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00251g06012.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix91.67.9e-29110195187
                  trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 
                               rW++qe+l+L+e+r++++++++++++k+plW+evs+ + +e+g++r+ k+C+ek+enl k+ykk+keg+ +r  ++ +++++f+q
  Peinf101Scf00251g06012.1 110 RWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRILsEEHGYQRTGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQ 192
                               8*************************************899*****************************98..55667****** PP

                  trihelix  85 lea 87 
                               lea
  Peinf101Scf00251g06012.1 193 LEA 195
                               *85 PP
2trihelix62.41.1e-19406489285
                  trihelix   2 WtkqevlaLiearremeerlrrg..klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 
                               W+++e+  Li++r++me+r+++   + ++ lWee++ km+  g+ +s+k+Ck+kw+++n +  k+++ +k++   +ss+c  f+ 
  Peinf101Scf00251g06012.1 406 WPESEITRLIQLRTSMESRFQQMgiSGDQVLWEEIAGKMACLGYDKSAKMCKNKWDSINSYLMKCNKKRKEN--STSSSCYNFHM 488
                               *********************9534799******************************************95..55567988887 PP

                  trihelix  85 l 85 
                               +
  Peinf101Scf00251g06012.1 489 I 489
                               6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.19107170IPR001005SANT/Myb domain
PROSITE profilePS500907.143109168IPR017877Myb-like domain
CDDcd122032.48E-19110175No hitNo description
PfamPF138374.6E-20110196No hitNo description
SMARTSM007170.19402466IPR001005SANT/Myb domain
PfamPF138371.7E-14404487No hitNo description
CDDcd122031.16E-20406471No hitNo description
PROSITE profilePS500906.516406464IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0010200Biological Processresponse to chitin
GO:0046621Biological Processnegative regulation of organ growth
GO:0048442Biological Processsepal development
GO:0048498Biological Processestablishment of petal orientation
GO:0090428Biological Processperianth development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 545 aa     Download sequence    Send to blast
MEDQYGIGDL RQYMNGRPLF TSIQPPPTDL LPRNLGPAHY EIVMGMAQVP SPHGMLPHHQ  60
HHEFLPDSTT AAATNSVTAG GTSSAGFSGL ENMEAAGGSS GLCGDAGSGR WPRQETLTLL  120
EIRSRLDSKF KEANQKGPLW DEVSRILSEE HGYQRTGKKC REKFENLYKY YKKTKEGKAG  180
RQDGKHYRFF RQLEALYGET SNNITASVSE AHHVGSHFPY NPAISNNNQD PHSFYNQAPK  240
LSDSLSLSSS SDFNTTSSDD SDLNDKEKSK KRRGKRSLKA KIKDFIDGQM RKLMEKQEAW  300
LEKMMKMIEH KEQERIVREE EWRKQETARM EREQKLWANE RAWIEARDAT LMDALHKLTG  360
KESKINTSTN NPPSEDQIVA AAEFRDQNDH GNEAMTSSSM KDDEHWPESE ITRLIQLRTS  420
MESRFQQMGI SGDQVLWEEI AGKMACLGYD KSAKMCKNKW DSINSYLMKC NKKRKENSTS  480
SSCYNFHMIN NEQGRSYCET RHVPNDHQNA GNATITDGCF RYLMGDHADN LWENYELKLS  540
KGGNN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1269274KKRRGK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754483e-66HG975448.1 Solanum pennellii chromosome ch09, complete genome.
GenBankHG9755213e-66HG975521.1 Solanum lycopersicum chromosome ch09, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019228205.10.0PREDICTED: trihelix transcription factor PTL
TrEMBLA0A314KN760.0A0A314KN76_NICAT; Trihelix transcription factor ptl
STRINGXP_009613783.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30632451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.11e-115Trihelix family protein