PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peinf101Scf00146g05036.1

Organism

Petunia inflata

Taxonomic ID

212142

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia

Family

Trihelix

Protein Properties

Length: 313aa MW: 36934.2 Da PI: 7.0906

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peinf101Scf00146g05036.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	56.4	7.6e-18	48	108	2	60
trihelix 2 WtkqevlaLiearremeerlrrgk..lkkplWeevskkmrergferspkqCkekwenlnkr 60 W++qe+++ i++r e+e++++++k k+lWe v+ km+erg++rs++qCk kw+nl k+ Peinf101Scf00146g05036.1 48 WSNQETRDFIAIRGELEREFSSAKrgDLKNLWEMVAVKMKERGYRRSAEQCKTKWNNLGKE 108 *******************87633569***************************875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	7.352	40	106	IPR017877	Myb-like domain
Pfam	PF13837	1.7E-17	47	127	No hit	No description
CDD	cd12203	6.91E-19	48	108	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence Send to blast
MFGGGGDNEQ NNLGQQFPQR LMLPHQQQQL PFHLLDDFPK RDERVPPWSN QETRDFIAIR 60 GELEREFSSA KRGDLKNLWE MVAVKMKERG YRRSAEQCKT KWNNLGKETS DPDNGGQFPF 120 FDELHALFTA SANNVHRLQL ESEPSSQQAR KRPRRTGKDH SSEEVSEDEE GYAYESDEVK 180 LGKSSVAPKK KIEKEKRPRT NNAEKPSRQP SLGSTNNTGR TVDNIQEMLK EFFQQQLRIE 240 VEWREAMEKR ARERELFEQE WRSSMEKLER DRMMIEQAWR EREEQRRIRE ESRAEKRDAL 300 LTTLLNKLIG ENP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019258089.1	1e-170	PREDICTED: trihelix transcription factor GT-3b-like
TrEMBL	A0A314LGE6	1e-168	A0A314LGE6_NICAT; Trihelix transcription factor gt-3b
STRING	XP_009614205.1	1e-165	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA10133	19	23

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	3e-26	Trihelix family protein