PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00044g11012.1
Organism
Petunia inflata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family FAR1
Protein Properties Length: 429aa    MW: 49365.1 Da    PI: 9.8823
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00044g11012.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1385.6e-12104169168
                      FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkv 68 
                               ++Yn+YA  +GFs+rk++ +k++ +g +t+r+++C+keg+r+ ++++   ++ ++ e++ g  a+l +
  Peinf101Scf00044g11012.1 104 EYYNDYAVAIGFSIRKEYANKHRVHGYVTSRKLTCYKEGYRDAKTNE--IRQFKNIEKKLGRVAQLIL 169
                               69****************************************99877..5666777777776666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.0E-9104162IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MESELSKKLA ILILRDFLSM GITRSREKIC KNKQKYKSFL LTKYNYNKRS QGKKYQLMNK  60
FIFWRIGDNT KTGLMEIPSS ESQNGCSVPI KLGMEFDLEE HAYEYYNDYA VAIGFSIRKE  120
YANKHRVHGY VTSRKLTCYK EGYRDAKTNE IRQFKNIEKK LGRVAQLILS LVINQMGNLV  180
YTMLALLEVL RSMHCKLFEF MGILCGHALK ILDIMNVKDM IFTHYILKRW TKDATNMNEM  240
DVSLVAKNSD QKAETVVRYR YLCQAFSSEA SESKERFELA AEAVNGLITK FRDMKMSDES  300
HVKSAPINST QNEPSETIFI DNTNITKVIE LKKKSSQLAV LILGQRVLWK RPRRKLKRHC  360
QGLLKSQSDQ QFDHPPSIEV PYPPSSYASM IAGVAEGSFQ PWCTSQLSQG SSNGSLSQLL  420
KDVSFNNFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1349357KRPRRKLKR
2350354RPRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019265391.16e-80PREDICTED: protein FAR1-RELATED SEQUENCE 1-like
RefseqXP_019265392.16e-80PREDICTED: protein FAR1-RELATED SEQUENCE 1-like
TrEMBLA0A314L2M54e-73A0A314L2M5_NICAT; Protein far1-related sequence 1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA269333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27110.28e-12FAR1-related sequence 3