PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_15419
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 595aa    MW: 67435.4 Da    PI: 6.6804
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_15419genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix106.81.4e-33450534186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rW+k ev+aLi++r+e++ ++++  lk+plWeevs++m + g++rs+k+Ckekwen+nk+++k ke+ +kr s++s+tcpyf+ql+
  PEQU_15419 450 RWPKIEVQALIQVRSELDGQFQEPGLKGPLWEEVSAAMTAMGYHRSAKRCKEKWENINKYFRKSKESGRKR-SQHSKTCPYFHQLD 534
                 8*********************************************************************8.89999********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.236443507IPR017877Myb-like domain
SMARTSM007170.0088447509IPR001005SANT/Myb domain
CDDcd122031.34E-27449514No hitNo description
PfamPF138375.5E-23449536No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 595 aa     Download sequence    Send to blast
MHSGFGGVSE IQQFMVDGST HSFFSISSNT PPTPNSVTTA GHEIYHPAAV APANRLINTF  60
YRHPSQYSQP TPPPPPHFPH FNSNIPITQQ LFTPPPQPRH HHHFQLFQSN QHDHRRLLDH  120
EHDQENSVGG PPHFLTADMK FKLAVDDSSC SGSRHTFNND NDIPGGILHD ENASDSRLRS  180
WHKEESCAIK EPFWRPLDLD YINSNNKRCK DKESAELNFA QRSRVTEELE NSHPGNNYKL  240
FSELEAIYKP GGSNSTATEP ANNNQTTTHA ANQTTGSGSA LTGDDHPLIP PVTAAFDLDY  300
RLEDDNSTGG EAQTNLKKAQ HHSRRCRRRR RRKMKSIAAF FEGLLKQLMG HQEALHQKFL  360
NVMEQRDKER VGQEELRREQ EASRARREAV ARAHDRELAA ARESAILCFL EKITGETINL  420
PSYPNVSSER NDAVDKEGDF ISPPLISTSR WPKIEVQALI QVRSELDGQF QEPGLKGPLW  480
EEVSAAMTAM GYHRSAKRCK EKWENINKYF RKSKESGRKR SQHSKTCPYF HQLDQLYSND  540
NGRKRKNSEL LDAVVVTGVG EEVGDSEGRR TAAEEAERED EEVDDESSQF VEQLQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1323330RRCRRRRR
2323331RRCRRRRRR
3326332RRRRRRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00651PBMTransfer from LOC_Os02g01380Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020579277.10.0trihelix transcription factor GT-2-like
TrEMBLA0A2I0WIR40.0A0A2I0WIR4_9ASPA; Trihelix transcription factor GT-2
STRINGGSMUA_Achr1P24120_0011e-139(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63993547
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.23e-47Trihelix family protein