PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_06750

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

TCP

Protein Properties

Length: 326aa MW: 36663.7 Da PI: 9.3038

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_06750	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.2	1.2e-37	54	197	3	133
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......ssssaseceaesssssasnsssg...... 88 +kd hski+T++g+RdRR+R s+++a+++FdLqd LGfdk+skt++W l+++k+aikel+g sss e+ s +s ++ + PEQU_06750 54 MRKDMHSKIYTAKGPRDRRMRFSLDVARKLFDLQDLLGFDKASKTVQWILTMSKAAIKELVGAasicmvvSSSEG---EDISTVSDNK----Distsai 145 69*************************************************************544443311111...1222222222....1224455 PP TCP 89 .....kaaksaakskksqksaasalnlakesrakarar..arertrekmrik 133 +++++ +++ ++++ ++ +ake r+karar arert ek++++ PEQU_06750 146 fasefEKNAKPKSRILRSRPISQPKLVAKELREKARARarARERTLEKKMMR 197 5666633333333344444444445666676655555533888999999887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	2.1E-36	55	196	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	32.104	55	113	IPR017887	Transcription factor TCP subgroup
PROSITE profile	PS51370	10.072	174	193	IPR017888	CYC/TB1, R domain

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence Send to blast
MFSQPYYTSS SFFPFSPPAF HQYSLHDIFI PAASGAEAGA PVSAQPIAGW KRKMRKDMHS 60 KIYTAKGPRD RRMRFSLDVA RKLFDLQDLL GFDKASKTVQ WILTMSKAAI KELVGAASIC 120 MVVSSSEGED ISTVSDNKDI STSAIFASEF EKNAKPKSRI LRSRPISQPK LVAKELREKA 180 RARARARERT LEKKMMRCCR PEDGSKSNQQ ANILKSIPLG SFLQEEYSSS HDLKSSLDFV 240 AEMEEHCSTS PIMYAKEHDH NGSSSAVVFD CNQQTAVSLF QEQWDHRSAF PNNYMDEKVL 300 FGEVSLQTSY GRGISMPSMF DHVTRV

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020584438.1	0.0	transcription factor CYCLOIDEA-like
TrEMBL	A0A1D6ZNI5	0.0	A0A1D6ZNI5_PHAEQ; TCP transcription factor
STRING	XP_008782352.1	9e-42	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7253	36	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	2e-24	TCP domain protein 12