PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr031258.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 182aa    MW: 19696.9 Da    PI: 5.2852
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr031258.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.3e-181766255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                  y+GVr +k +g+Wv+eIr+p   g ++r++lg+f t+e+Aa+a++ a++ ++g
  Pbr031258.1 17 AYRGVRKRK-WGKWVSEIREP---GTKTRIWLGSFETPEMAAAAYDVAALHFRG 66
                 69****999.**********8...325***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.07E-231676No hitNo description
SuperFamilySSF541711.11E-221675IPR016177DNA-binding domain
PROSITE profilePS5103223.6831774IPR001471AP2/ERF domain
SMARTSM003803.1E-391780IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.9E-321775IPR001471AP2/ERF domain
PfamPF008476.9E-121766IPR001471AP2/ERF domain
PRINTSPR003673.6E-101829IPR001471AP2/ERF domain
PRINTSPR003673.6E-104056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MGDPANSSNA YGPASSAYRG VRKRKWGKWV SEIREPGTKT RIWLGSFETP EMAAAAYDVA  60
ALHFRGREAR LNFPELVNNL PRPASSTSDD IRMAAHEAAL MLRGSGGGGG GGVAEGHEVG  120
GSSSNVGQVR VRLSPSQIQA INESPLDSPK MWMQMAEPTM FSNDVFENQW EDMQNDSLWD  180
P*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-171879668ATERF1
3gcc_A7e-171879668ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00227DAPTransfer from AT1G71450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr031258.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009357202.11e-131PREDICTED: ethylene-responsive transcription factor ERF021-like
SwissprotQ9C9I27e-70ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLA0A498JF791e-101A0A498JF79_MALDO; Uncharacterized protein
STRINGXP_009357202.11e-131(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.16e-69ERF family protein