PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf02133g00004.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 370aa    MW: 41721.6 Da    PI: 7.0175
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf02133g00004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.5e-19176226256
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  Peaxi162Scf02133g00004.1 176 LYRGVRQRH-WGKWVAEIRLPRK---RTRLWLGTFDTAEDAAMAYDREAYKLRGE 226
                               59******9.**********954...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.72E-33175235No hitNo description
SuperFamilySSF541711.44E-22176234IPR016177DNA-binding domain
SMARTSM003801.0E-38176239IPR001471AP2/ERF domain
PROSITE profilePS5103223.09176233IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-32176234IPR001471AP2/ERF domain
PfamPF008472.8E-12177226IPR001471AP2/ERF domain
PRINTSPR003675.7E-11177188IPR001471AP2/ERF domain
PRINTSPR003675.7E-11199215IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009651Biological Processresponse to salt stress
GO:2000070Biological Processregulation of response to water deprivation
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MAAFKDSSES DKPMQEETSS HRPFKKIKSP ESQLSFQFSV SSSHQTLLPS FPFTSSVSSS  60
SLSNYSFYPT PRVVFPLALD GTQQSMESLH QLRSNDTPLF RPLHQNHQQM ISFSPQYPQY  120
FGGELGKFQH QYWNETTLNL SPAGKTTTMM MNKLGQDNRA PLFRPLLQPP YSTTKLYRGV  180
RQRHWGKWVA EIRLPRKRTR LWLGTFDTAE DAAMAYDREA YKLRGENAKL NFPELFLGKH  240
KGTTSLNLSL TSPITSQEPE KAPESIQLQY PLQPQYGGDN FEQNLRMGSS EVIASDEVQG  300
NVENSCASSQ LSDFEAWLNA IPDGWGPGSP VWDDLDTNNS LILPHCYDLS KKSNDTGPSS  360
SPSCPMRPFS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-21175233160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018623980.11e-140PREDICTED: ethylene-responsive transcription factor ERF053-like
TrEMBLA0A314KTP41e-136A0A314KTP4_NICAT; Ethylene-responsive transcription factor erf053
STRINGXP_009592286.11e-138(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA47182136
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.16e-58ERF family protein